Pairwise Alignments

Query, 647 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  206 bits (523), Expect = 3e-57
 Identities = 144/512 (28%), Positives = 242/512 (47%), Gaps = 12/512 (2%)

Query: 137 YDPRVRPWYQAAIAAPGKTVRTGAYYWAPDDVTLIGTVHTVADATGNILGVVGLDVSLKQ 196
           +DPR R WY  A      T      Y       L+ T         ++ GV+  D+ L  
Sbjct: 122 FDPRTRSWYLNAKKL--NTFSLSEPYVDLITEKLMVTTSAPIYNKNDLTGVIFFDIPLDD 179

Query: 197 LTELVRNIKLGDSGYLMLVEGNGNVLVDPSD---AKHNFKPLADLGPNYAELAKRGDGVT 253
           + EL+++    D+G + +V+ +G ++    +    K+ F        + +E   +     
Sbjct: 180 VQELIKSYNPFDAGTIFIVDNSGKIIFGNKNDISGKNLFGDFDSFPLSVSESKTK----- 234

Query: 254 QIEIDGVAYMANMVSSKDLGWRFIGLIKRDEVMAGATRLTWLIAAIAAVLALVFAIVGAS 313
             + +GV Y   +  S   GW  + +I  D+  +    L       A +LA VF  +   
Sbjct: 235 --DKNGVNYDVLIKMSDFGGWNLVSIIDHDKARSDIITLRNNSIFTAVILASVFFAILLF 292

Query: 314 FASVIVRPIRGVADGLQEIAEGEGDLTRQLKVQGKDETASLAGWFNQFLSMIAQLVQRIG 373
              ++++P+  + D +  I+ G  DLT ++      E + +   FN F+  +  +V  + 
Sbjct: 293 TMRLMLKPLHQLTDAMVNISSGSADLTVRIPNSTDQEFSKIINSFNIFVGNLQSIVSEVK 352

Query: 374 NASSDLQSAAADTREVAHNMNQAAGRQREAVELVSTAFNEMVATANEVARSCSAAATSAD 433
             S  +     +T+E+    N +   Q   +++++++ NEMVAT+N++A+  S A+    
Sbjct: 353 MNSEKINCITTETQELVEVCNNSVADQYRELDMLASSMNEMVATSNQIAQITSEASEITS 412

Query: 434 EGYRDVHDGQQHIGEATGSVLKLSEDLQRSTQTMQQLEQDSKNINTILDTIRSIAEQTNL 493
           +    V++G   +   T SV  L E L ++   +Q L + ++NI+ IL  I  IA+QTNL
Sbjct: 413 KINGQVNEGVGAVSSVTESVGNLVEKLDKTKSVIQDLNRQTQNIDVILKAINDIADQTNL 472

Query: 494 LALNAAIEAARAGDQGRGFAVVADEVRALARRTADSTGEIDSLLGNLARRTQEVTQQMQG 553
           LALNAAIEAARAG+ GRGFAVVADEVR+LA +T +ST  I S++  L   +      M  
Sbjct: 473 LALNAAIEAARAGENGRGFAVVADEVRSLAIKTQESTKNIGSIIHILQENSLLSVHVMDE 532

Query: 554 SLLVSHTSVERIQQARDSFDKIRGSVDSIRDQNTQIATAAEEQHQVAEEINRHIAQIHAD 613
           S  ++  ++     ++   D I  SV  I D   Q+ATAA EQ  V+EEIN +   I   
Sbjct: 533 SFNIASETMTISADSKQCLDNISQSVIQIVDITNQVATAAYEQSHVSEEINSNSISIKDK 592

Query: 614 AQLVEGFAHSAQTGSGRLTDISGQLKGLVGRF 645
           A  +    +     +     + G    L+ +F
Sbjct: 593 ADTLSSLGNKISQQAYSQKALIGHQDDLISKF 624