Pairwise Alignments

Query, 391 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 335 a.a., LacI family transcription regulator (RefSeq) from Shewanella amazonensis SB2B

 Score = 56.2 bits (134), Expect = 1e-12
 Identities = 50/215 (23%), Positives = 99/215 (46%), Gaps = 10/215 (4%)

Query: 58  QGDGIIA-DFDDPLI-GEALAGSKLPVVAVGGSYEDVRAYPKGMPYVATDNYALIKLAYE 115
           + DG+I  D   P    +A   + +P+V+V    E  R YP    ++  DN+A  +    
Sbjct: 115 RADGLIQLDHSFPFSDNDADLAATIPMVSVCERIEGDRKYP----FIELDNHAAGRALAH 170

Query: 116 HLIEAGLTRFACFSLPEAQANRWAQEREKAFRRLLQRDGLQVEVYRGLGTSAPLWDSAVE 175
           HLI  G   F   +    + ++   +R      +LQ +G+  +    +G+S  + ++ +E
Sbjct: 171 HLIGFGHKHFGIIA--GQRRSQIHHDRLTGIMSVLQGEGIDFKEDMLVGSSYSI-ETGIE 227

Query: 176 QQIAWLHSLPKPIGIIAVTDARARQLLQACLTAGIAVPEEVALIGIDNDPLTRTLTRVPL 235
                L   P+P  I    D  A   +    + G+ +P+++++ G DN  ++  +   PL
Sbjct: 228 GARELLSRNPRPSAIFCFNDDIAIGAMFEIKSQGLKIPDDISVTGFDNVKVSAYMD-PPL 286

Query: 236 SSVIQGTETMGRTAAALLHQMLHGKPCRGEQILVP 270
           +++ Q    MGR A  +L Q ++  P    ++++P
Sbjct: 287 TTIDQPAYEMGRNAVEVLVQQINRLPLARSRVIMP 321