Pairwise Alignments

Query, 438 a.a., Xylose isomerase (EC 5.3.1.5) (from data) from Pseudomonas simiae WCS417

Subject, 434 a.a., xylose isomerase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  520 bits (1338), Expect = e-152
 Identities = 252/434 (58%), Positives = 317/434 (73%), Gaps = 3/434 (0%)

Query: 3   YFPGVEKVRFEGPSSDAPLAFRHYDANKLILGKPMREHLRMAACYWHTFVWPGADMFGVG 62
           +F G+  V +EGP + +  AFRHY+ +++++GK M + LR A  +WH+F W G D FG  
Sbjct: 4   FFAGIPAVTYEGPEARSDFAFRHYNPDEMVMGKRMEDQLRFAVAWWHSFAWEGGDPFGGP 63

Query: 63  TFKRPWQRSGDPMELAIGKADAAFEFFSKLGIDYYSFHDTDVAPEGSSLKEYRHHFAQMV 122
           TF+RPW   GD ++ A  KADAAFE F  L + +Y FHD D+ PEG+S  E   +   MV
Sbjct: 64  TFQRPW--FGDTLDHARAKADAAFEMFRILNVPFYCFHDADIRPEGASFAETTANLEAMV 121

Query: 123 DHLERHQEHTGIKLLWGTANCFSNPRFAAGAASNPDPEVFAYAAAQVFSAMNATLRLKGS 182
           D+L + QE +G +LLWGTAN FS+ R+ AGAA+NPDP+VFAYAAA + + M+AT +L G+
Sbjct: 122 DYLGQKQEASGKRLLWGTANLFSHRRYMAGAATNPDPDVFAYAAATIKTCMDATHKLGGA 181

Query: 183 NYVLWGGREGYETLLNTDLKREREQLGRFMRMVVEHKHKIGFKGDLLIEPKPQEPTKHQY 242
           NYVLWGGREGYETLLNTDL REREQ GR ++MVV++KHKIGF+G +L+EPKPQEPTKHQY
Sbjct: 182 NYVLWGGREGYETLLNTDLGREREQAGRMLQMVVDYKHKIGFEGTILLEPKPQEPTKHQY 241

Query: 243 DYDSATVFGFLHEYGLEHEIKVNIEANHATLAGHSFHHEIATAVSLGIFGSIDANRGDPQ 302
           DYD ATVF FL E+GL+ E+K+NIE  HA LAGHSF HE+A A   GI GSID NR D Q
Sbjct: 242 DYDVATVFSFLSEFGLQDEVKMNIEQGHAILAGHSFEHELALAREFGILGSIDMNRNDYQ 301

Query: 303 NGWDTDQFPNSVEEMTLATYEILKAGGFKNGGYNFDSKVRRQSLDDVDLFHGHVAAMDVL 362
           +GWDTDQFPN++ E+ LA YEIL+AGGF  GG NFDSK+RRQSLD  DL   HVAAMDV 
Sbjct: 302 SGWDTDQFPNNIPEVALAYYEILRAGGFDTGGTNFDSKLRRQSLDPADLIAAHVAAMDVC 361

Query: 363 ALALERAAAMVENDRLQQFKDQRYAGWQQPLGQAVLAGEFSLESLAEHAFAHELDPQAVS 422
           A  L+ AA M+E+  L+Q ++ RYAGW+ P  +A+L G   LE    H     LDPQ VS
Sbjct: 362 AAGLKAAARMLEDGELEQRREDRYAGWRAPSAEAMLNGG-KLEDCFAHVMETGLDPQPVS 420

Query: 423 GRQEMLEGVVNRFI 436
           G QE LE +V R++
Sbjct: 421 GGQERLEALVARYL 434