Pairwise Alignments

Query, 333 a.a., sugar ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 296 a.a., sugar uptake ABC transporter substrate-binding protein precursor from Sinorhizobium meliloti 1021

 Score = 71.2 bits (173), Expect = 3e-17
 Identities = 82/275 (29%), Positives = 132/275 (48%), Gaps = 36/275 (13%)

Query: 1   MKSFKRTLIA-TALALLALPAMADSAHPKIGFSIDDLRLERWSRDRDYFVAAAEKLDAK- 58
           M    +TL+A TAL LLA  A AD     IG S+        ++   +++  AE + A+ 
Sbjct: 3   MPRILKTLVAGTALTLLASGAFADG----IGASL-------LTQQHPFYIELAEAMKAEA 51

Query: 59  ----VFVQSADANEQ--KQISQIENLISRGVDVIVIVPFNATVLTNAVAEAKKAGIKVVS 112
               V ++ A AN+   KQ++ +E+ I +GVDVIVI P ++  +  A+A+A+KAGIKV++
Sbjct: 52  KEKNVALEVAIANQDLNKQLADVEDFIVKGVDVIVISPVDSQGVRAAIAKAEKAGIKVIT 111

Query: 113 YDRLILNADIDAYISFDN----EKVGEMQASGVLQAAPKGNYFLLGGAPTDNNAKVLREG 168
            D     A + ++I  DN     K GE+ A  +     KG   ++   PT  +       
Sbjct: 112 VDVPANGATVTSHIGTDNFTGGVKAGELMAEVL---GNKGKVAII-DYPTVQSV----VN 163

Query: 169 QMKVLQPAIDK-GDIKVVGQQWVKEWNPTEALSIVENALTRNNNKIDAIVASNDATAGGA 227
           ++   + AI K  ++++V  Q        EAL+  +N L  N + I  I    D  A  A
Sbjct: 164 RVNGFKEAIAKHPEMEIVATQ--TGITRAEALAAAQNMLQANPD-ITGIFGFGDDAALAA 220

Query: 228 IQALAAQKLAGKVPISGQDADLAAIKRVIDGTQTM 262
             A+ A  L  +V + G D  +   +  +DG   M
Sbjct: 221 AVAVKAAGLESQVKVIGFDG-MKEARDAVDGNPVM 254