Pairwise Alignments

Query, 333 a.a., sugar ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 355 a.a., sugar uptake ABC transporter substrate-binding protein precursor from Sinorhizobium meliloti 1021

 Score =  161 bits (407), Expect = 3e-44
 Identities = 113/354 (31%), Positives = 188/354 (53%), Gaps = 25/354 (7%)

Query: 1   MKSFKRTLIATALAL--LALPAMADSAHPKIGFSIDDLRLERWSRDRDYFVAAAEKLDAK 58
           MK F   L A A+ +   A PA+A      +G S+      RW  D +      ++    
Sbjct: 1   MKFFTSLLAAAAITVAGFAAPAVAQEKG-MVGISMPTKTSTRWISDGETMEKLFKEAGYT 59

Query: 59  VFVQSADANEQKQISQIENLISRGVDVIVIVPFNATVLTNAVAEAKKAGIKVVSYDRLIL 118
             +Q AD +   Q++QIEN++++G  V+VI   + T L++ + +A  AG+KV++YDRLI 
Sbjct: 60  PDLQFADDDIPNQLAQIENMVTKGAKVLVIGAIDGTTLSDILQKAADAGVKVIAYDRLIR 119

Query: 119 NA-DIDAYISFDNEKVGEMQASGVLQ------AAPKGNYFLLGGAPTDNNAKVLREGQMK 171
           ++ ++D Y +FDN +VG +QA+ +++      A    N  L GG+P DNNA    +G M 
Sbjct: 120 DSGNVDYYATFDNFQVGVLQATSLVEGLKLDSATEPKNVELFGGSPDDNNAFFFYDGAMS 179

Query: 172 VLQPAIDKGDIKV------VGQQWVKEWNPTEALSIVENALTR--NNNKIDAIVASNDAT 223
           VLQP ID G I V      + Q     W+   A + +EN L+    + K+D +++  D  
Sbjct: 180 VLQPLIDSGKIVVKSGQMGMDQVGTLRWDGAVAQARMENLLSSAYTDAKVDGVLSPYDGL 239

Query: 224 AGGAIQALAAQKL-AGKVP---ISGQDADLAAIKRVIDGTQTMTVYKPLKLIASEAAKLS 279
           + G I AL      +G +P   ++GQDA+L ++K ++ G Q  TV+K  + +A     + 
Sbjct: 240 SIGIISALKGVGYGSGDMPMPIVTGQDAELPSVKSILAGEQYSTVFKDTRELAKVTVNMV 299

Query: 280 VQLARNEKPTY--SSQYDNGSKKVDTILLTPTPLTKANI-DLLEKDGFYTKEQI 330
             +   ++P    +  Y+NG K V + LL P  + K+N  D+L   G+YT++Q+
Sbjct: 300 NAIMDGKEPEVNDTKTYENGVKVVPSYLLKPVSVDKSNAKDVLVGSGYYTEDQL 353