Pairwise Alignments

Query, 333 a.a., sugar ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 322 a.a., sugar uptake ABC transporter substrate-binding protein precursor from Sinorhizobium meliloti 1021

 Score = 80.9 bits (198), Expect = 4e-20
 Identities = 83/328 (25%), Positives = 150/328 (45%), Gaps = 31/328 (9%)

Query: 5   KRTLIATALALLALPA---MADSAHPKIGFSIDDLRLERWSRDRDYFVAAAEKLDAKVFV 61
           K+++    LAL+A  A   +A++A  K+G ++  L    ++      VAAAE    K   
Sbjct: 2   KKSIAGCMLALMASVASAGIANAADCKVGIAMYTLGAPYFAAQ----VAAAEDQAKKAGC 57

Query: 62  QSADANEQ----KQISQIENLISRGVDVIVIVPFNATVLTNAVAEAKKAGIKVVSYDRLI 117
           +   A+ Q    KQI+ +E++++RGV+++++ P +   L  A   A  AG+KVV  D  I
Sbjct: 58  EVTSADGQNDMTKQIADVEDMVARGVNLLILNPRDPEGLVAAADAATAAGVKVVVMDSSI 117

Query: 118 -LNADIDAYISFDNEKVGEMQASGVLQAAPKGNYFLLGGAPTDNNAKVLREGQMKVLQPA 176
              A++   +   N++ G +     L  A KG    +     D   +V R+ ++ V +  
Sbjct: 118 NTKANVVTQVRSSNDQNGVLVGQW-LANAMKGKPMKIILLSGDKGNEVGRDRRLGVFKGL 176

Query: 177 ID-------KGDIKVVGQQWVKEWNPTEALSIVENALTRNNNKIDAIVASNDATAGGAIQ 229
           ++       K   +VVGQ W   W     L+ +E+ LT + +  + ++  ND+   GA++
Sbjct: 177 VEGQLVNDGKVSFEVVGQGW-GGWAHEGGLAAMEDLLTAHPD-ANVVLGENDSMVLGAMK 234

Query: 230 ALAAQKLAGKVPISGQDADLAAIKRVIDGTQTMTVYKPLKLIASEAAKLSVQLARNEKPT 289
           AL AQ     + ++  D    A+  + +G    T      L+A  A  + ++    E P 
Sbjct: 235 ALEAQGKTDVLALAAADGQKEALALIKEGKYGATGLNDPDLVARTAVDVGLKAVNGELPA 294

Query: 290 YSSQYDNGSKKVDTILLTPTPLTKANID 317
              + +         L TP  +TK N+D
Sbjct: 295 DFPKLN---------LTTPAVITKENVD 313