Pairwise Alignments

Query, 333 a.a., sugar ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 307 a.a., hypothetical protein from Klebsiella michiganensis M5al

 Score = 90.9 bits (224), Expect = 4e-23
 Identities = 80/293 (27%), Positives = 147/293 (50%), Gaps = 21/293 (7%)

Query: 3   SFKRTLIATALALLALPAMADSAHPKIGFSI---DD--LRLERWSRDRDYFVAAAEKLDA 57
           + K+T++A+ +A + LPA+  +    +G S+   DD  L + R +  ++      +K   
Sbjct: 2   NIKKTVVASLIACM-LPAVVMAKDISVGVSMALFDDNFLTILRTAMQKEM-----QKDGV 55

Query: 58  KVFVQSADANEQKQISQIENLISRGVDVIVIVPFNATVLTNAVAEAKKAGIKVVSYDR-- 115
           K  V+ A  +  +Q+ Q++N I +GVD I++ P +   +   + +A KAGI ++  +R  
Sbjct: 56  KAQVEDAKGDVSQQLQQVQNFIGQGVDAIIVNPVDTNAVKPIMDQATKAGIPLIFVNRRP 115

Query: 116 LILNADIDAYISFDNEKVGEMQASGVLQAA-PKGNYFLLGGAPTDNNAKVLREGQMKVLQ 174
                D  AY+  D+   G +Q   + +A   KGN  +L G   + + +   +G  +V+ 
Sbjct: 116 QAQLTDKMAYVGSDSVLAGRLQMEALAKAMNGKGNVAILLGDLANESTRDRTKGVEEVV- 174

Query: 175 PAIDKGDIKVVGQQWVKEWNPTEALSIVENALTRNNNKIDAIVASNDATAGGAIQALAAQ 234
                 DIK+V +Q  K +   +A+ +V N +T +   I AI ++ND  A GA+QAL   
Sbjct: 175 --AKYPDIKIVQKQTAK-FTRNDAVDVVSNWMT-SGEDIQAIASNNDEMAIGALQALG-- 228

Query: 235 KLAGKVPISGQDADLAAIKRVIDGTQTMTVYKPLKLIASEAAKLSVQLARNEK 287
           K    + I+G D    A++ + +G    T+++  K     A   +++LA  EK
Sbjct: 229 KNPNHILIAGVDGTPDALQMLKNGKMIATIFQDAKGQGEGAVDAAIKLANGEK 281