Pairwise Alignments

Query, 333 a.a., sugar ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 296 a.a., D-ribose ABC transporter substrate-binding protein from Klebsiella michiganensis M5al

 Score = 73.2 bits (178), Expect = 8e-18
 Identities = 72/290 (24%), Positives = 135/290 (46%), Gaps = 12/290 (4%)

Query: 1   MKSFKRTLIATALALLALPAMADSAHPKIGFSIDDLRLERWSRDRDYFVAAAEKLDAKVF 60
           M   K   + +A+AL A  +    A   I   I  L    +   ++     A+KL   + 
Sbjct: 1   MNMKKLATLVSAVALSATVSANAMAKDTIALVISTLNNPFFVSLKEGAQKEADKLGYNLV 60

Query: 61  VQSADANEQKQISQIENLISRGVDVIVIVPFNATVLTNAVAEAKKAGIKVVSYDRLILNA 120
           V  +  N  K+++ +++L  RG  +++I P ++  + NAV  A +A I V++ DR     
Sbjct: 61  VLDSQNNPAKELANVQDLTVRGTKLLLINPTDSDAVGNAVKLANQAKIPVITLDRQASKG 120

Query: 121 DIDAYISFDNEKVGEMQASGVLQAAPKGNYFL-LGGAPTDNNAKVLREGQMKVLQPAIDK 179
           D+ ++I+ DN   G+M    + +   +    + L G    + A+   EG     Q A+  
Sbjct: 121 DVVSHIASDNVLGGKMAGDYIAKKVGENAKIIELQGIAGTSAARERGEG----FQQAVAA 176

Query: 180 GDIKVVGQQWVKEWNPTEALSIVENALTRNNNKIDAIVASNDATAGGAIQALAAQKLAGK 239
               V+  Q   +++ T+ L++++N LT + + + A+ A ND  A GA++AL   + AGK
Sbjct: 177 HKFNVLASQ-PADFDRTKGLNVMQNLLTAHPD-VQAVFAQNDEMALGALRAL---QTAGK 231

Query: 240 --VPISGQDADLAAIKRVIDGTQTMTVYKPLKLIASEAAKLSVQLARNEK 287
             V + G D      K V  G    T+ +  + I  +  + + ++ + EK
Sbjct: 232 SDVMVVGFDGTPDGEKAVNSGKLAATIAQLPEQIGVKGVETADKVLKGEK 281