Pairwise Alignments

Query, 518 a.a., xylose transporter from Pseudomonas simiae WCS417

Subject, 506 a.a., L-arabinose ABC transporter, ATPase component (from data) from Sinorhizobium meliloti 1021

 Score =  369 bits (946), Expect = e-106
 Identities = 201/472 (42%), Positives = 305/472 (64%), Gaps = 5/472 (1%)

Query: 39  LCGENGAGKSTLMKVLSAVYPYGTWEGEILWDGQPLKAQSISETEAAGIVIIHQELTLVP 98
           L G+    KSTLMKVLS VYP GT+EGEI +DG+  +  +IS++E  GI+IIHQEL LVP
Sbjct: 31  LSGKTAPAKSTLMKVLSGVYPAGTYEGEIHYDGELRQFSTISDSEELGIIIIHQELALVP 90

Query: 99  DLSVAENIFMGHELTLPGGRMNYPAMFHRAEALMRELKVPDMNVALPVSQYGGGYQQLVE 158
            LS+AENIF+G+E+    G +++P  F R + L++++ + +    L ++  G G QQLVE
Sbjct: 91  LLSIAENIFLGNEVA-EKGVIHWPQTFARTQELLKKVGLNESPATL-ITDIGVGKQQLVE 148

Query: 159 IAKALNKQARLLILDEPSSALTRSEIEVLLDIIRGLKAKGVACVYISHKLDEVAAVCDTI 218
           IAKAL+K+ RLLILDEP+++L  ++ + LL ++   +++G+  + ISHKL+E+  V D I
Sbjct: 149 IAKALSKKVRLLILDEPTASLNENDSDALLKLLMEFRSQGMTSIIISHKLNEIKKVADQI 208

Query: 219 AVIRDGKHIATTAMADMDIA--KIITQMVGREMSNLYPTEPHAVGEVIFEARNVTCHDVD 276
            ++RDG  + T      DI+  +II  MVGR M + YP     +G+ + E +N   +   
Sbjct: 209 TILRDGGTVETLDCHKEDISEDRIINGMVGRAMEDRYPPREPKIGDTLLEVKNWNVYHQH 268

Query: 277 NPKRKRVDDVSFVLKRGEILGIAGLVGAGRTELVSALFGAYPG-RYSAEVWLDGQVIDTR 335
           +  R+ + DVSF ++ GE++GIAGL+GAGRTE   ++FG   G + + EV + G+ +D  
Sbjct: 269 HRDRQFLHDVSFKVRAGEVVGIAGLMGAGRTETAMSVFGKSWGHKITGEVTMHGRPVDVS 328

Query: 336 TPLKSIRAGLCMVPEDRKRQGIIPDLGVGQNITLTVLDSYAHRTRIDAEAELGSIDQQIA 395
           T  K+I+AGL  V EDRK+ G++    +  N TL  L + A    ID   E     +  +
Sbjct: 329 TIPKAIKAGLAYVTEDRKQLGLVLINNIMHNTTLANLHAVASNGVIDERKERKVAAEYRS 388

Query: 396 RMHLKTASTFLPITSLSGGNQQKAVLAKMLMAKPKVLILDEPTRGVDVGAKYEIYKLMGA 455
           ++ +++ S +    +LSGGNQQK VL+K L   P+VLILDEPTRG+D+GAKYEIY ++  
Sbjct: 389 KLRIRSHSIYQETVNLSGGNQQKVVLSKWLFTNPEVLILDEPTRGIDIGAKYEIYTIINQ 448

Query: 456 LAAEGVAIIMVSSELAEVLGVSDRVLVIGDGQLRGDFINEGLTQEQVLAAAL 507
           LAAEG  I+M+SSE+ E+LG  DR+ V+ +G++  +   E  +QE ++ A +
Sbjct: 449 LAAEGKGILMISSEMPELLGTCDRIYVMNEGRMVAELSKEEASQESIMRAIM 500



 Score = 70.5 bits (171), Expect = 1e-16
 Identities = 55/210 (26%), Positives = 98/210 (46%), Gaps = 6/210 (2%)

Query: 24  LNGIDIRVRPGECVGLCGENGAGKS-TLMKVLSAVYPYGTWEGEILWDGQPLKAQSISET 82
           L+ +  +VR GE VG+ G  GAG++ T M V    + +    GE+   G+P+   +I + 
Sbjct: 275 LHDVSFKVRAGEVVGIAGLMGAGRTETAMSVFGKSWGHKI-TGEVTMHGRPVDVSTIPKA 333

Query: 83  EAAGIVII---HQELTLVPDLSVAENIFMGH-ELTLPGGRMNYPAMFHRAEALMRELKVP 138
             AG+  +    ++L LV   ++  N  + +       G ++       A     +L++ 
Sbjct: 334 IKAGLAYVTEDRKQLGLVLINNIMHNTTLANLHAVASNGVIDERKERKVAAEYRSKLRIR 393

Query: 139 DMNVALPVSQYGGGYQQLVEIAKALNKQARLLILDEPSSALTRSEIEVLLDIIRGLKAKG 198
             ++        GG QQ V ++K L     +LILDEP+  +       +  II  L A+G
Sbjct: 394 SHSIYQETVNLSGGNQQKVVLSKWLFTNPEVLILDEPTRGIDIGAKYEIYTIINQLAAEG 453

Query: 199 VACVYISHKLDEVAAVCDTIAVIRDGKHIA 228
              + IS ++ E+   CD I V+ +G+ +A
Sbjct: 454 KGILMISSEMPELLGTCDRIYVMNEGRMVA 483