Pairwise Alignments

Query, 518 a.a., xylose transporter from Pseudomonas simiae WCS417

Subject, 512 a.a., sugar ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  369 bits (946), Expect = e-106
 Identities = 204/508 (40%), Positives = 310/508 (61%), Gaps = 22/508 (4%)

Query: 5   SDYLLQMNGIVKSFGGVNALNGIDIRVRPGECVGLCGENGAGKSTLMKVLSAVYPYGTWE 64
           S+ +L++  + K FG V AL  +D R+  GE   LCGENGAGKSTLM V++ V      E
Sbjct: 3   SETVLEIRNVSKHFGAVKALTAVDFRLARGEVHALCGENGAGKSTLMNVIAGVLQPS--E 60

Query: 65  GEILWDGQPLKAQSISETEAAGIVIIHQELTLVPDLSVAENIFMGHELTLPGGRMNYPAM 124
           GE+L +G P+K  S +  ++ GI ++HQE+ L PD ++AEN+FM          MNY  +
Sbjct: 61  GEVLIEGAPVKIASPAVAQSLGIALVHQEIALCPDATIAENMFMAATNRRRSALMNYAQL 120

Query: 125 FHRAEALMRELKVPDMNVA---LPVSQYGGGYQQLVEIAKALNKQARLLILDEPSSALTR 181
              A+A+M  L   D++     LP+S      QQLVEIAKAL    R+LI DEP++ALT 
Sbjct: 121 ERDAQAVMNRLAPIDVSQKVGDLPISS-----QQLVEIAKALTLDCRVLIFDEPTAALTE 175

Query: 182 SEIEVLLDIIRGLKAKGVACVYISHKLDEVAAVCDTIAVIRDGKHIATTAMADMDIAKII 241
           +E +VL  IIR LKA+G++ +YISH++ EV ++CD + V RDG+++AT  ++D+    ++
Sbjct: 176 TEAQVLFGIIRDLKARGISIIYISHRMAEVFSLCDRVTVFRDGRYVATEMVSDVTPDDVV 235

Query: 242 TQMVGREMSNLYPTEPHA---VGEVIFEARNVTCHDVDNPKRKRVDDVSFVLKRGEILGI 298
             MVGRE+S LYP +  +   +GE I   R++          +R  DVSF L+ GEILG+
Sbjct: 236 RLMVGREISQLYPDKQPSSERLGEPILSVRDLG--------GERFRDVSFELRYGEILGV 287

Query: 299 AGLVGAGRTELVSALFGAYPGRYSAEVWLDGQVIDTRTPLKSIRAGLCMVPEDRKRQGII 358
            GL+G+GRTE+   +    P     E+ L  +V+  R    + +AG+  + EDRK  G+ 
Sbjct: 288 GGLIGSGRTEIAEGICALRPVT-QGEIRLHDKVLRLRRYSDAAKAGVVYLSEDRKGSGVF 346

Query: 359 PDLGVGQNITLTVLDSYAHRTRIDAEAELGSIDQQIARMHLKTASTFLPITSLSGGNQQK 418
            DL + QNI    L +      +++  E    +    R+ ++     +P++SLSGGNQQK
Sbjct: 347 LDLSIAQNIAALDLKALTSLGLLNSREERALAEDLTRRLGVRMGGVDMPVSSLSGGNQQK 406

Query: 419 AVLAKMLMAKPKVLILDEPTRGVDVGAKYEIYKLMGALAAEGVAIIMVSSELAEVLGVSD 478
             +AK L   PKV+++DEPTRG+DVGAK EI++L+  LA  G+ I+++SSEL E++G+ D
Sbjct: 407 VAIAKQLAVDPKVILMDEPTRGIDVGAKSEIHRLLRELARAGIGILVISSELPELIGLCD 466

Query: 479 RVLVIGDGQLRGDFINEGLTQEQVLAAA 506
           RVLV+ +G++ G+     +T+E ++  A
Sbjct: 467 RVLVVREGRIAGEVSGNEMTEEVIMRLA 494