Pairwise Alignments

Query, 378 a.a., D-xylose ABC transporter permease from Pseudomonas simiae WCS417

Subject, 337 a.a., galactose/methyl galactoside ABC transporter permease MglC from Vibrio cholerae E7946 ATCC 55056

 Score =  166 bits (421), Expect = 7e-46
 Identities = 121/391 (30%), Positives = 187/391 (47%), Gaps = 80/391 (20%)

Query: 4   VKHLFTR--YKMLALVIAVAVIWVFFSWQTEGGFLTPRNLSNLLRQMSITGILACGMVLV 61
           +KHL     Y +L +++A+ VI        E  FL+ RNLSN+L Q S+  I+A G+  +
Sbjct: 11  IKHLKEGAIYAVLFILLAIIVI-------QEPSFLSLRNLSNILTQSSVRVIIALGVAGL 63

Query: 62  IISGEIDLSVGSLLGLLGGLAAIL-----------DVVYHIPLLANLSLVALCGLMIGLA 110
           I++   DLS G  +GL   ++A L             +  IP+LA +  V L G +IGL 
Sbjct: 64  IVTQGTDLSAGRQVGLAAVISATLLQSMDNVNKVFPSLGEIPILAVIISVCLIGAIIGLV 123

Query: 111 NGYMTAYLRIPSFIVGLGGMLAFRGI---LLGITGGTTIAPVSPSLVYVGQGYLPHSVGI 167
           NG + AYL++  FI  LG M+   GI        G + IA          QG+      I
Sbjct: 124 NGVIVAYLKVTPFIATLGTMIIVYGINSLYYDSVGASPIAGFDERFTTFTQGF------I 177

Query: 168 GLGVLLFSLTVFLTWKQRRNRALHGLAAHSLVRDLVRVAVIGAVLAGFVTTLNSYDGIPV 227
            +G   FS   F                              A++A              
Sbjct: 178 RIGDFRFSYITFY-----------------------------AIIA-------------- 194

Query: 228 PVLLLLVLLGVFSYVTSQTVFGRRVYAVGSNMEATRLSGINVQAVKLWIFGIMGVMCALA 287
            ++ + VL        ++TVFG+ ++AVG N EA ++SG+NV    L ++ + GV  A  
Sbjct: 195 -IIFMWVLW-------NKTVFGKNIFAVGGNPEAAKVSGVNVPLTLLKVYALSGVFYAFG 246

Query: 288 GLVNTARLAAGSPSAGNMGELDAIAACFIGGTSMRGGSGTVYGALLGALVITSLDNGMSM 347
           G++   R+ + + + G + ELDAIAAC +GG S  GG G++ G + G L+ T ++ GM+ 
Sbjct: 247 GMLEAGRIGSATNNLGFLYELDAIAACVVGGVSFAGGVGSIAGVVTGVLIFTVINYGMTY 306

Query: 348 LDVDSYWQMIVKGSILVLAVWVDVSTRAGRR 378
           + V  YWQ I+KGSI++ AV +D    A ++
Sbjct: 307 IGVSPYWQYIIKGSIIIFAVALDSMKYANKK 337