Pairwise Alignments

Query, 378 a.a., D-xylose ABC transporter permease from Pseudomonas simiae WCS417

Subject, 334 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  170 bits (430), Expect = 6e-47
 Identities = 119/365 (32%), Positives = 170/365 (46%), Gaps = 62/365 (16%)

Query: 14  LALVIAVAVIWVFFSWQTEGGFLTPRNLSNLLRQMSITGILACGMVLVIISGEIDLSVGS 73
           L++++A   ++V  S  T+  F T  NL NLLRQ+S+ GILA G   + ISGEIDLSVG+
Sbjct: 31  LSVILAALAMFVALSLSTDT-FFTELNLLNLLRQISVIGILAVGSTFIFISGEIDLSVGA 89

Query: 74  LLGLLGGLAAILDVVYHIPLLANLSLVALCGLMIGLANGYMTAYLRIPSFIVGLGGMLAF 133
           LLGLL  + A L +     +     +V   G ++   NG +T  LRIPSFI  LG     
Sbjct: 90  LLGLLAMICAALAIKMEGNIYGAALVVVALGAILSGINGVITTKLRIPSFITTLG----- 144

Query: 134 RGILLGITGGTTIAPVSPSLVYVGQGYLPHSVGIGLGVLLFSLTVFLTWKQRRNRALHGL 193
              +L I  G T+                                             G+
Sbjct: 145 ---MLSIYSGATLV-----------------------------------------LSKGM 160

Query: 194 AAHSLVRDLVRVAVIGAVLAGFVTTLNSYDGIPVPVLLLLVLLGVF-SYVTSQTVFGRRV 252
               L  DL R  V G +            G+    ++ +V  G+F +Y+   T FG  V
Sbjct: 161 PISGLQNDLFRSLVAGRLF-----------GVVPAQVIWMVAAGIFGTYLLLFTRFGYNV 209

Query: 253 YAVGSNMEATRLSGINVQAVKLWIFGIMGVMCALAGLVNTARLAAGSPSAGNMGELDAIA 312
           +A G N  A +  GIN   VK+  F + G+M  +   +         P  GN  EL  IA
Sbjct: 210 FATGGNKNAAKAVGINTDRVKILAFVVSGIMVGVTSFILVGWFRGVDPQTGNGLELSVIA 269

Query: 313 ACFIGGTSMRGGSGTVYGALLGALVITSLDNGMSMLDVDSYWQMIVKGSILVLAVWVDVS 372
           A  IGGT + GG G+V G L+GAL+I  + NG  +L VDSY++ +  G++++LAV +D+ 
Sbjct: 270 AVIIGGTGLFGGQGSVLGTLVGALIIGMISNGTVLLGVDSYYEPVAHGTVILLAVIIDIW 329

Query: 373 TRAGR 377
            R  R
Sbjct: 330 VRRQR 334