Pairwise Alignments

Query, 378 a.a., D-xylose ABC transporter permease from Pseudomonas simiae WCS417

Subject, 320 a.a., sugar uptake ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  164 bits (416), Expect = 2e-45
 Identities = 111/362 (30%), Positives = 184/362 (50%), Gaps = 66/362 (18%)

Query: 17  VIAVAVIWVFFSWQTEGGFLTPRNLSNLLRQMSITGILACGMVLVIISGEIDLSVGSLLG 76
           ++ + +++ FF+ +    F+T  N  N+L+Q+++  I A GM  VI+ GEIDLSVGS++ 
Sbjct: 25  LVMLCIVFSFFNPR----FMTVVNFMNILQQVAVVAIAAFGMTWVILLGEIDLSVGSIIA 80

Query: 77  LLGGLAAILDVVYHIPLLANLSLVALCGLMIGLANGYMTAYLRIPSFIVGLGGMLAFRGI 136
           + G + A     + +     ++L    G ++G+ NG +TA L +PSFIV +  M  +RG+
Sbjct: 81  VAGMVGAQC-FAFGMGFAPAIALTLAAGALMGMLNGVLTAKLLLPSFIVTVATMGIYRGM 139

Query: 137 LLGITGGTTIAPVSPSLVYVGQGYLPHSVGIGLGVLLFSLTVFLTWKQRRNRALHGLAAH 196
           +   T G      + +   +G         +GL ++++ + V     Q            
Sbjct: 140 VSLPTNGAPAMIENETWTAIGTESF-----LGLPIIIWVVAVLFVINQ------------ 182

Query: 197 SLVRDLVRVAVIGAVLAGFVTTLNSYDGIPVPVLLLLVLLGVFSYVTSQTVFGRRVYAVG 256
                                           ++L     G  +Y+T            G
Sbjct: 183 --------------------------------IVLSKTSFGRRAYLT------------G 198

Query: 257 SNMEATRLSGINVQAVKLWIFGIMGVMCALAGLVNTARLAAGSPSAGNMGELDAIAACFI 316
            N EA   SGI V  +K+ IF I GVM A++G++ ++RL +   +AG   ELDAIAA  +
Sbjct: 199 GNREAAVYSGIKVDRLKILIFMISGVMAAISGVLLSSRLFSAQTNAGMSYELDAIAAAVL 258

Query: 317 GGTSMRGGSGTVYGALLGALVITSLDNGMSMLDVDSYWQMIVKGSILVLAVWVDVSTRAG 376
           GGTS+ GG GT+ G L+GAL+I  ++NGM+ML V  ++Q+IVKG ++++AVW+DV  +  
Sbjct: 259 GGTSLAGGVGTMVGTLIGALIIGVMNNGMNMLSVPYFYQLIVKGLVILVAVWLDVRAKQA 318

Query: 377 RR 378
           +R
Sbjct: 319 KR 320