Pairwise Alignments

Query, 378 a.a., D-xylose ABC transporter permease from Pseudomonas simiae WCS417

Subject, 336 a.a., sugar uptake ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  138 bits (347), Expect = 3e-37
 Identities = 99/344 (28%), Positives = 165/344 (47%), Gaps = 63/344 (18%)

Query: 35  FLTPRNLSNLLRQMSITGILACGMVLVIISGEIDLSVGSLLGLLGGLAAIL---DVVYH- 90
           F++  NL+N+  + +   I+A G   VI +G++DLSVGS++  +  L  +     V+   
Sbjct: 45  FISLNNLANVATRSAFIAIIAVGATFVISAGDLDLSVGSMVAFVASLMILFMNSGVIADP 104

Query: 91  -IPLLANLSLVALCGLMIGLANGYMTAYLRIPSFIVGLGGMLAFRGILLGITGGTTIAPV 149
            + L A +    + G + GLANG +T   RI  FI  LG M  +RG+   ++ G  I   
Sbjct: 105 ALMLTAAVLFAVVAGSVCGLANGLITTVGRIEPFIATLGTMGIYRGLTTWLSQGGAITLR 164

Query: 150 SPSLVYVGQGYLPHSVGIGLGVLLFSLTVFLTWKQRRNRALHGLAAHSLVRDLVRVAVIG 209
            P L                                              ++L R A  G
Sbjct: 165 EPEL----------------------------------------------QELYRPAYFG 178

Query: 210 AVLAGFVTTLNSYDGIPVPVLLLLVLLGVFSYVTSQTVFGRRVYAVGSNMEATRLSGINV 269
           ++L           G+PVP+ ++L +  V +++  +T +GR V AVGSN +  R SGI V
Sbjct: 179 SIL-----------GMPVPIAIILAVTAVAAFILYRTRYGRHVVAVGSNSDVARYSGIAV 227

Query: 270 QAVKLWIFGIMGVMCALAGLVNTARLAAGSPSAGNMGELDAIAACFIGGTSMRGGSGTVY 329
             V+   F I G+  A+A L+   RL + S + G + EL AI A  +GGT+++GG+G V+
Sbjct: 228 NRVRTIAFVIQGLCVAVAVLLYVPRLGSTSATTGILWELQAITAVVVGGTALKGGAGRVW 287

Query: 330 GALLGALVITSLDNGMSMLD-VDSYWQMIVKGSILVLAVWVDVS 372
           G + GA ++  + N M + + +  Y    ++G+I+++A+ V  S
Sbjct: 288 GTICGAFILELVGNIMLLSNFISEYLIGAMQGAIIIIAMLVQRS 331