Pairwise Alignments

Query, 378 a.a., D-xylose ABC transporter permease from Pseudomonas simiae WCS417

Subject, 317 a.a., L-arabinose transporter permease from Sinorhizobium meliloti 1021

 Score =  168 bits (425), Expect = 2e-46
 Identities = 110/375 (29%), Positives = 188/375 (50%), Gaps = 66/375 (17%)

Query: 4   VKHLFTRYKMLALVIAVAVIWVFFSWQTEGGFLTPRNLSNLLRQMSITGILACGMVLVII 63
           +K L    + L ++ A A + V     T   FLT RN+  LL+ +   G++AC M+  + 
Sbjct: 5   LKKLLLGEQGLLVIFAAAFVVVAL---TVPNFLTERNMLGLLQSVVTIGVVACTMMFCLA 61

Query: 64  SGEIDLSVGSLLGLLGGLAAILDVVYHIPLLANLSLVALCGLMIGLANGYMTAYLRIPSF 123
           S + DLSVGS +   G +A +        +L  L+ +A CG ++GLANG + A  RI + 
Sbjct: 62  SRDFDLSVGSTVAFSGMVAVMASNATGSIVLGLLAALA-CGGIVGLANGIVIARFRINAL 120

Query: 124 IVGLGGMLAFRGILLGITGGTTIAPVSPSLVYVGQGYLPHSVGIGLGVLLFSLTVFLTWK 183
           I  L  M   RG  L  + G  +    P    +                  SL+ FLT  
Sbjct: 121 ITTLATMQIVRGFALIASDGRAVGINDPVFYQL------------------SLSKFLT-- 160

Query: 184 QRRNRALHGLAAHSLVRDLVRVAVIGAVLAGFVTTLNSYDGIPVPVLLLLVLLGVFSYVT 243
                                                    +P P+ ++ +   VF ++ 
Sbjct: 161 -----------------------------------------VPTPIWVMALFFIVFGFLL 179

Query: 244 SQTVFGRRVYAVGSNMEATRLSGINVQAVKLWIFGIMGVMCALAGLVNTARLAAGSPSAG 303
           ++TVFG+   A+G N EA+RL+G++V  +++WIF + G++CA+AG++  +R+ +G P+A 
Sbjct: 180 NRTVFGKNTLAIGGNPEASRLAGVDVARMRIWIFALQGLVCAVAGVLLASRITSGQPNAA 239

Query: 304 NMGELDAIAACFIGGTSMRGGSGTVYGALLGALVITSLDNGMSMLDVDSYWQMIVKGSIL 363
              EL  I+AC +GG S+ GG  T+ G ++G L++   +N M++L++ +++Q +V+G IL
Sbjct: 240 TGLELSVISACVLGGVSLAGGRATMTGVVVGVLIMGIAENVMNLLNIQAFYQYVVRGLIL 299

Query: 364 VLAVWVD-VSTRAGR 377
           ++AV +D + + AGR
Sbjct: 300 LIAVLLDNMRSVAGR 314