Pairwise Alignments

Query, 378 a.a., D-xylose ABC transporter permease from Pseudomonas simiae WCS417

Subject, 339 a.a., ribose ABC transporter permease from Klebsiella michiganensis M5al

 Score =  147 bits (372), Expect = 3e-40
 Identities = 102/332 (30%), Positives = 167/332 (50%), Gaps = 64/332 (19%)

Query: 40  NLSNLLRQMSITGILACGMVLVIISGEIDLSVGSLLGLLGGLAAILDVVYHIPLLANLSL 99
           NL N+ R +S+  ILA GM  VI++  IDLSVGS++ + G ++ +               
Sbjct: 50  NLLNIARSISVNAILAAGMTFVILTSGIDLSVGSIVAVSGVVSVV--------------- 94

Query: 100 VALCGLMIGLANGYMTAYLRIPSFIVGLGGMLAFRGILLGITGGTTIAPVSPSLVYVGQG 159
            A+ G+   LA             + G+G      G L G+  G   A ++ +       
Sbjct: 95  AAMAGIPAPLA------------ILAGVGV-----GALCGLLNGVLTAYLALA------- 130

Query: 160 YLPHSVGIGLGVLLFSLTVFLTWKQRRNRALHGLAAHSLVRDLVRVAVIGAVLAGFVTTL 219
             P  V +G    L  +   +T  Q                      ++ + L+ F    
Sbjct: 131 --PFIVTLGTMTFLRGMAYTITEGQ---------------------PIVSSSLS-FRELG 166

Query: 220 NSY-DGIPVPVLLLLVLLGVFSYVTSQTVFGRRVYAVGSNMEATRLSGINVQAVKLWIFG 278
           N Y  GIP+PV+++LV+  +  ++  +T FGR +YAVG N +A RL+G+ V+ V   ++ 
Sbjct: 167 NGYLIGIPIPVIIMLVVYLLAWFILERTRFGRHIYAVGGNAQAARLAGVRVKRVLAAVYM 226

Query: 279 IMGVMCALAGLVNTARLAAGSPSAGNMGELDAIAACFIGGTSMRGGSGTVYGALLGALVI 338
           I GV   LAG++  AR+ +  P+AG   ELDAIAA  +GGTS+ GG G + G L+G++++
Sbjct: 227 IAGVCAGLAGIIFAARVISAQPTAGTGYELDAIAAVVLGGTSLAGGRGRIIGTLIGSIIL 286

Query: 339 TSLDNGMSMLDVDSYWQMIVKGSILVLAVWVD 370
             L  G+ +L V  + Q+++KG +++LAV +D
Sbjct: 287 GVLSTGLILLSVPFFTQLLIKGIVIILAVAID 318