Pairwise Alignments

Query, 313 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  144 bits (364), Expect = 2e-39
 Identities = 93/271 (34%), Positives = 137/271 (50%), Gaps = 6/271 (2%)

Query: 18  VLEEQGTYTAAAARLGVSKSAVSQRISDLEKATGTRLVTRTTRSVRLTDAGLSLTREVRS 77
           ++ + G +T AA  LGVS+S VS+++S LE + G  LV RTTRS+ LTDAG    R+   
Sbjct: 16  LIAKLGNFTKAAEELGVSRSHVSRQLSQLENSMGVTLVIRTTRSLSLTDAGELFYRQCEQ 75

Query: 78  AYEQIARSFSSVRDSVGEIRGLLRLTAPVAFARQQLVPHL-SEFLQQYPQVRLQLDVSDA 136
           A   I ++  +  D V E RG LR+ +      ++L+  + S F+Q+ P VR+ LD S  
Sbjct: 76  ALSSIEQAVLAAVDDVQEARGELRINSVGGHIGEELIADICSAFMQENPDVRIHLDFSSH 135

Query: 137 LSSLAAEGYDLAVRHGFQVPETHVAWKLCDTGSVLVASQDYLQRHGEPREPGDLSAHNCL 196
              L  EG+D+A R G     + VA KL +     +AS  Y    G+P+ P  L+ H CL
Sbjct: 136 RVDLIEEGFDVAFRMGKLEDASFVARKLTEIRMSTLASPAYFTLCGQPQHPKQLADHRCL 195

Query: 197 FYPRGTDQPAWTFERGTKNVERLTVPIAGSFATNNSEALRDSALNHLGIALLPDFSAHAA 256
                     W+++   +  + L VP+ G     N   L  +AL H GI  +P F  H  
Sbjct: 196 ----TGSVKRWSYQH-KETKQTLDVPVDGDLQCKNGRVLVRAALAHNGIIRVPTFYCHQE 250

Query: 257 LSSGKLVQVLKGWTLKGAFADEIYLIRPYSP 287
           L+ G+LV+V + W +       IY    Y P
Sbjct: 251 LARGELVEVFQDWHIPSVEFSLIYHKDKYQP 281