Pairwise Alignments

Query, 566 a.a., AMP-dependent synthetase from Pseudomonas simiae WCS417

Subject, 539 a.a., bifunctional 4-hydroxybenzoate--CoA/benzoate--CoA ligase from Rhodopseudomonas palustris CGA009

 Score =  171 bits (432), Expect = 9e-47
 Identities = 153/522 (29%), Positives = 238/522 (45%), Gaps = 25/522 (4%)

Query: 31  LGEFNWALDYFDA-MAEGNPADALWIVEEDGSEQRYSFQQLAARSNQVANHLRALGVNRG 89
           L ++N A+D+ D  +AEG      +I      ++  S+ +L     +V   L  LGV + 
Sbjct: 3   LRDYNAAVDFVDRNVAEGRGGKIAFI----DPQRSLSYGELRDAVARVGPMLARLGVEQE 58

Query: 90  DRVLLMLGNDVALWDTMLAAFKLGAVVIPATALLNPDDLRDRIERGQVRHVVVGEAHV-- 147
           +R+ L+L + V        A + G V +     L  D  R  +E  + R V      +  
Sbjct: 59  NRIALVLKDTVDFPILFWGAIRAGIVPVLLNTRLTADQYRYLLEDSRSRVVFASSEFLPV 118

Query: 148 --HKFAGLAQGCSRICVGSAPAGWVAHNAAFEYPEQFEAQGRTLATDPMLLYFTSGTTSK 205
                A L    + I VG APA  +         ++  A   T A D     ++SGTT  
Sbjct: 119 IEEAAADLPHLRTIIAVGDAPAPTLQLANLLATEQEGGAPAATCADDIAYWQYSSGTTGM 178

Query: 206 PKMVLHSHQSYPVGHLSTMYWIGLQPGDLHLNISSPGWAKHAWSCLFAPWNAGACIFIHN 265
           PK V+H H S  V   +    IG +  D+  + +   +A    + +F P   GA   ++ 
Sbjct: 179 PKGVMHVHSSPRVMAENAGRRIGYREDDVVFSAAKLFFAYGLGNAMFCPMGIGATSVLYP 238

Query: 266 VARFSAPALLSALERYGVTSLCAPPTVWRMLIQEDLASYRPRLS-----LRELVGAGEPL 320
             R +A ++   L  +  T L A PT++  +    LA  R R       LR  V AGEPL
Sbjct: 239 -ERPTADSVFDTLRLHQPTLLFAVPTLYAAM----LADPRSRTETLPDRLRLCVSAGEPL 293

Query: 321 NPEIIEQIQQAWGLPLRDGFGQSETTALVGNTPGQLLKPGSMGRPLPGYQVALLDPDGIP 380
             ++    +  +G  + +G G +E   L        ++ G+ G P+ GY++ L+   G  
Sbjct: 294 PAQVGLNWRNRFGHDIVNGVGSTEMGHLFLTNLPHAVEYGTSGVPVDGYRLRLVGDRGQD 353

Query: 381 GNEGEVALPLDVRPLGLMLCYEDSPEKTAEVMRDGYYRTGDTAQIDADGYITFVGRADDV 440
             + E+   L V        Y +  +KT       + RTGD     ADG  T+ GR DD+
Sbjct: 354 VADDEIG-ELLVSGGSSAAGYWNQRDKTRTTFVGEWTRTGDKYHRRADGVYTYCGRTDDI 412

Query: 441 FKASDYRISPFELESALIEHPAVMEVAVVPSPDPLRLAVPKAFLILAHD---EPGSAALA 497
           FK S   +SPFE+E AL+ H  V+E AV+P+ D   L  PKAF++LA     +PG  AL 
Sbjct: 413 FKVSGIWVSPFEIEQALMSHAKVLEAAVIPAEDTDGLIKPKAFIVLASRGDIDPG--ALF 470

Query: 498 QHILAFAREHLAPYKRVRRIEFVTELPKTISGKIRRVELRQM 539
             +    +  + P+K  R I+ + +LPKT SGK++R  LR+M
Sbjct: 471 DELKEHVKSAIGPWKYPRWIQIMDDLPKTSSGKLQRYLLREM 512