Pairwise Alignments

Query, 566 a.a., AMP-dependent synthetase from Pseudomonas simiae WCS417

Subject, 557 a.a., AMP-binding protein from Methanococcus maripaludis S2

 Score =  361 bits (926), Expect = e-104
 Identities = 209/539 (38%), Positives = 306/539 (56%), Gaps = 19/539 (3%)

Query: 19  YATAVRDFRWPQLGEFNWALDYFDAMAEGNPADALWIVEEDGSEQR-YSFQQLAARSNQV 77
           Y   V +F+      FN+A D  D  A+  P     I  +D ++++ ++F+ +   S++ 
Sbjct: 17  YEDFVENFKIDVPENFNFAYDIVDEYAKIAPEKIAIIWCDDNNDEKIFTFKDMKKYSDKA 76

Query: 78  ANHLRALGVNRGDRVLLMLGNDVALWDTMLAAFKLGAVVIPATALLNPDDLRDRIERGQV 137
           AN     G+ +GD V+L L +    W  ML   K+GAV IPAT +L   D+  RIE+  +
Sbjct: 77  ANFFLKHGIKKGDTVMLTLKSRYEFWFCMLGLHKIGAVAIPATHMLTTKDIVYRIEKAGL 136

Query: 138 RHVV-VGEAHVHKFAGLAQGCSRICVGSAPAGWVAHNAAFEYPEQFEAQGR--------- 187
           + +V +GE  V  +   A       V  A    + +++  ++ ++ E             
Sbjct: 137 KMIVCIGENGVPDYVDEAVSEINSDVLKACVSNLNNDSWIDFSKELEESSEDFTRPVGEM 196

Query: 188 -TLATDPMLLYFTSGTTSKPKMVLHSHQSYPVGHLSTM-YWIGLQPGDLHLNISSPGWAK 245
            T   D ++ YF+SGTT  PK++ H H+ YP+GH++T  YW  ++   LH  ++  GWAK
Sbjct: 197 DTKNDDVLVAYFSSGTTGYPKLIQHDHE-YPLGHITTAKYWQNVEDDGLHYTVADSGWAK 255

Query: 246 HAWSCLFAPWNAGACIFIHNVARFSAPALLSALERYGVTSLCAPPTVWRMLIQEDLASYR 305
                L+  W AG  +F+++  RF A  +L  + +Y +T+ CAPPT++R +I++D+ S  
Sbjct: 256 CIRGKLYGQWIAGTAVFVYDYDRFDAGNMLEKIAKYKITTFCAPPTIYRFMIKQDI-SKA 314

Query: 306 PRLSLRELVGAGEPLNPEIIEQIQQAWGLPLRDGFGQSETTALVGNTPGQLLKPGSMGRP 365
              SL   V AGEPLNPE+  +  +  GL L +GFGQ+ET   V N      KPGSMG+P
Sbjct: 315 DFSSLHYAVTAGEPLNPEVYNKFLEFTGLRLMEGFGQTETVVSVANFTWMDPKPGSMGKP 374

Query: 366 LPGYQVALLDPDGIP---GNEGEVALPL-DVRPLGLMLCYEDSPEKTAEVMRDGYYRTGD 421
           +P + + +  PDG     G EGE+A    D +PLGL   Y   PE+T +   DGYY TGD
Sbjct: 375 VPIFDLMIKGPDGKECDVGEEGELAFKTEDGKPLGLFSGYFKDPERTKKAWYDGYYHTGD 434

Query: 422 TAQIDADGYITFVGRADDVFKASDYRISPFELESALIEHPAVMEVAVVPSPDPLRLAVPK 481
           TA  D DGY+ FVGR DD+ K+S YRI PFE+ESALI HPAV+E A+   PDP+R  + K
Sbjct: 435 TAWKDEDGYLWFVGRNDDLIKSSGYRIGPFEVESALISHPAVLECAITGVPDPVRGQIVK 494

Query: 482 AFLILAHDEPGSAALAQHILAFAREHLAPYKRVRRIEFVTELPKTISGKIRRVELRQME 540
           A ++L  +   S  L + +    + + APYK  R IEFV ELPKTISGKIRRVE+R+ +
Sbjct: 495 ATIVLTSEYEASEELKKELQDHVKHNTAPYKYPRAIEFVKELPKTISGKIRRVEIRETD 553