Pairwise Alignments

Query, 739 a.a., Deoxyribose 1-dehydrogenase, beta subunit (from data) from Pseudomonas simiae WCS417

Subject, 750 a.a., Oxidoreductase from Sinorhizobium meliloti 1021

 Score = 85.9 bits (211), Expect = 7e-21
 Identities = 98/413 (23%), Positives = 166/413 (40%), Gaps = 63/413 (15%)

Query: 197 DPSQ----FRWIGKPVKRLDAYDKSTGKALYSIDLKVDNMLHAAVQHAPRLGMTVGSLRN 252
           DPS     F  +G    R D  DK TG+A Y  D  +   L   +  +P     +  +  
Sbjct: 4   DPSHSKRSFSSVGTRPIRPDGVDKVTGRARYGADFNMPGQLVGRILRSPHAHAIIRKIDT 63

Query: 253 --QSQVEGMKGVHSVHVLP-----------------------------GAVAVVAERWWH 281
              +Q+ G+K V +   LP                              AVA +  R   
Sbjct: 64  LKAAQLPGVKAVLTAADLPDLTDGDAAMYDILDNCMARKKALYDGHAVAAVAAIDART-- 121

Query: 282 AKRAVEAIQVDWQ---------EAAADSALRVMPADFSSDKHREFLAAQQGPTRDDENEG 332
           AK+A++ I+V+++         +A A  A  +    F++    +         R     G
Sbjct: 122 AKQALKLIEVEYELLPHVTDVDQAFAPDAPLINDTIFTTGVDPKPDRPSNVSMRSQFGHG 181

Query: 333 DVAGALKGAKTQVEATYHNQYLNHAQLEPPSALARFNPDGTLEIWLPNQAPDMFRADIAK 392
           DV   +  A   VE T+  +  +   +EP + +A  + DGT ++W+  Q   ++R   A+
Sbjct: 182 DVDAGMARADFVVERTFKTEQTHQGYIEPHACVASVSSDGTADLWVCTQGHFVYRQHCAQ 241

Query: 393 RTGLDPAQITLHSPLLGGFFG--RHFLYDSANPYPQAIALAKAVSRPIKLIWSREEEFLR 450
             G+D +++ + S  +GG FG   H   +     P A+AL++   RP+KL+ +R+E F  
Sbjct: 242 LLGMDASKLRVTSSEIGGGFGGKTHVWAE-----PVALALSRKAGRPVKLVMTRDEVFRA 296

Query: 451 DVLRPLAVVKFR-AALDDKGLPVAIEAVSATEGPTEALAGKQGDKIDPTAVEGLSGKSYA 509
                   +  +  AL D  +  A   +  + GP    AG   +    TA        Y 
Sbjct: 297 SGPTSATSIDVKIGALKDGTIIAADATLRYSCGP---YAGAWAEVGAMTAF-----ACYK 348

Query: 510 IPNKR-IAQIYVKGAPMLGYWRSVGNSLNDFFYESFLDELADKGGHDPYELRL 561
           + N R +    +   P    +R+    +  F  ES +DELA K G +P + R+
Sbjct: 349 LENVRTVGYEVLVNRPKTAAYRAPSAPMAAFAVESAIDELAKKVGMNPIDFRI 401



 Score = 53.9 bits (128), Expect = 3e-11
 Identities = 46/138 (33%), Positives = 65/138 (47%), Gaps = 15/138 (10%)

Query: 607 FGSHTAAIAEVSIENGKVKVHDIWQAIDPGSIVNPAIVEAQVNGAVALGLSQTLLEEAVY 666
           F +H   I EV  E G  KV       D G  V+P  VE Q  G  A G+   L EE +Y
Sbjct: 608 FATHICDI-EVDPETGATKVLRYTVVQDAGKAVHPTYVEGQYQGGAAQGIGWALNEEYIY 666

Query: 667 -VDGKPRARNYDLYPILAPAQMARVHVRVVESGEK-----MGGIGE----PPLPAVAPAV 716
             DG+ +   +  Y I   + +  +  +++E         + G+GE    PPL AVA AV
Sbjct: 667 GNDGRLQNAGFLDYRIPVCSDLPMIDTQILEIPNPNHPYGVRGVGETSIVPPLAAVANAV 726

Query: 717 ANAVAQLTGQRVRSLPLS 734
           +NAV    G R+  +P+S
Sbjct: 727 SNAV----GVRMLHIPMS 740



 Score = 34.7 bits (78), Expect = 2e-05
 Identities = 37/128 (28%), Positives = 57/128 (44%), Gaps = 14/128 (10%)

Query: 50  GTQVPAFLEIRPDGTVRLLSPFMEGGQGTHTAMAQIVGEELDADPA---TFIVEAAPPGE 106
           G Q    L I  DGTV L    ++ G G+  +++ +  EEL  D +   T I + +  G 
Sbjct: 456 GGQTCTDLNIGMDGTVSLAVGTVDVG-GSRASLSLVAAEELGIDYSQVRTVIADTSSLG- 513

Query: 107 AYVVMENGLRITGGSMSVRMSYPTMRRLGALARAMLLQAGAKQWGVPVGELTTQPGRVVH 166
            Y  M +G R T  S    +S          A  +L +  A+ W +PV ++T + G  V 
Sbjct: 514 -YNDMTDGSRGTFSSSMATIS------AARNAIKILRERAAQMWDIPVEDVTWEKGHAV- 565

Query: 167 AASGRSLG 174
            A G + G
Sbjct: 566 -AKGETHG 572