Pairwise Alignments

Query, 353 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 463 a.a., ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal from Pseudomonas syringae pv. syringae B728a

 Score =  167 bits (423), Expect = 5e-46
 Identities = 105/282 (37%), Positives = 159/282 (56%), Gaps = 7/282 (2%)

Query: 67  VSLAVGAFVATKLSRRILMPLNSVAENLRKLADGDLDVQ-AVAGDESIGEAAILVNDFNS 125
           +SL +   +A  ++R +L P+  VA    +LA G+   + AV+ ++ +G+   L  DFN 
Sbjct: 172 LSLLLAVLIAWWIARTLLDPVKRVAAATHRLAAGEYASRVAVSSNDEVGQ---LARDFNQ 228

Query: 126 MAQRLKRMAQEQAFWNAAIAHELRTPLTILRGRLQGLAEGVFEPDTAQFYSLLGQVEGLA 185
           +A  L+R  + +  + A ++HELRTPL++LRG L+ + +GV   D A   SL G+V  L+
Sbjct: 229 LAYTLERNEKMRREFMADVSHELRTPLSVLRGELEAIEDGVRTLDQASMKSLQGEVGMLS 288

Query: 186 RMIEDLRVVGLGDSGYLEVNVQDADLAAGVEDDVRLFEPSLAAAGFTLQLDLQRRTL--R 243
           ++++DL  + L D G L     D DLA  + +   +FE   AA    LQL+L    L   
Sbjct: 289 KLVDDLYELSLADVGALTYRKVDCDLAELLTNITDMFEERCAARQLHLQLELAGGALPVH 348

Query: 244 CDPARIRQALLALLDN-VRRHATPGNVNVHLSTRDGVHYLRVRDDGPGIDEDFATHLFEA 302
            DP R++Q +  LL+N VR     G V+V  + +     + V D GPG+D      LFE 
Sbjct: 349 ADPGRLQQLIGNLLENSVRYTDAGGTVHVRAALQGDEVRVDVMDSGPGVDPQQLPRLFER 408

Query: 303 FQRGENSRSRAQGGSGLGLAVVRAIAIAHGGAVTCRKMENGG 344
           F RGE SR+RA GG+GLGLA+  +IA+AHGG ++      GG
Sbjct: 409 FYRGETSRNRASGGAGLGLAICHSIALAHGGTLSADHSPTGG 450