Pairwise Alignments

Query, 353 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 372 a.a., HAMP domain-containing sensor histidine kinase from Synechocystis sp000284455 PCC 6803

 Score =  131 bits (329), Expect = 3e-35
 Identities = 99/308 (32%), Positives = 153/308 (49%), Gaps = 17/308 (5%)

Query: 57  EWAWMGLTTCVSLAVGAFVATKLS----RRILMPLNSVAENLRKLADGDLDVQAVAGDES 112
           E AW   ++  ++  GA  A  LS     RI+ PL+ +    + LA+GDL  +    D  
Sbjct: 64  ETAW-NRSSLWAIIFGASAAGGLSFLAADRIMQPLDRLKLATKNLAEGDLQSRMPPSD-- 120

Query: 113 IGEAAILVNDFNSMAQRLKRMAQEQAFWNAAIAHELRTPLTILRGRLQGLAEGVFEPDTA 172
           I E   L   FN MA  L+ + Q++    + + HELR+PLT++RG L+ LAEG    D  
Sbjct: 121 IPELEELGQSFNRMADSLENVEQQRRELVSDLTHELRSPLTVVRGYLEQLAEGTIAGDPE 180

Query: 173 QFYSLLGQVEGLARMIEDLRVVGLGDSGYLEVNVQDADLAAGVEDDVRLFEPSLAAAGFT 232
            +  L+G+   L R+  DL+ +   ++GYL +  Q  DL   +    + F   L   G  
Sbjct: 181 LYQRLVGETRRLERLTVDLQELSKVEAGYLSIQRQPLDLYPLLAKLQQRFADQLLEDGPE 240

Query: 233 LQLDLQ--RRTLRCDPARIRQALLALLDNVRRHATPG--NVNVHLST------RDGVHYL 282
           L L +Q    T+  DP R  Q L+ L+ N  R+   G   ++ +L T      ++ + ++
Sbjct: 241 LILAVQPPLPTVLADPDRAEQILVNLIGNAVRYTPSGAITIDAYLCTNRKDMEKENLLWV 300

Query: 283 RVRDDGPGIDEDFATHLFEAFQRGENSRSRAQGGSGLGLAVVRAIAIAHGGAVTCRKMEN 342
            V D G GI E    ++FE F R + SRSR  GG+GLGLA+ + +    GG++T      
Sbjct: 301 TVTDTGIGIAEGDLPYVFERFWRADKSRSRYSGGTGLGLAIAKRLVELQGGSLTVTSTLG 360

Query: 343 GGTLFELS 350
            G+ F  S
Sbjct: 361 QGSEFRFS 368