Pairwise Alignments

Query, 353 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 536 a.a., HAMP domain-containing protein from Pseudomonas fluorescens SBW25-INTG

 Score =  120 bits (300), Expect = 1e-31
 Identities = 95/329 (28%), Positives = 154/329 (46%), Gaps = 16/329 (4%)

Query: 32  VFYALLWTYWPLPDEQVDEWMPANAEWAWMGLTTCVSLAVGAFVATKLSRRILMPLNSVA 91
           VF  ++ T W L    + +  P  A+W  + L   + L +   +   L R++   L  + 
Sbjct: 208 VFAGMVGTPWVLEIGPLYQMSPYPAQW--LVLIALIGLTLIGLIVYLLVRQLERRLRGLE 265

Query: 92  ENLRKLADGDLDVQAVA-GDESIGEAAILVNDFNSMAQRLKRMAQEQAFWNAAIAHELRT 150
               ++A G+L+V+  A G +S+G  A     FN MA+ L+++   Q     A++HELRT
Sbjct: 266 AAATRIAKGNLEVRVPARGADSVGRLAAA---FNGMAEHLQQLLAIQRELVRAVSHELRT 322

Query: 151 PLTILRGRLQGLAEGVFEPDTAQFY--SLLGQVEGLARMIEDLRVVGLGDSGYLEVNVQD 208
           P+  LR  L+ + +    P+  + Y   +   ++ L  +++++      + G  E+N Q 
Sbjct: 323 PVARLRFGLEMVGDAT-TPEARRKYLEGMDSDIQDLDGLVDEMLTYARLEQGSPELNFQR 381

Query: 209 ADLAAGVEDDVRLFEPSLAAAGFTLQLDLQR-----RTLRCDPARIRQALLALLDNVRRH 263
            DL A ++  +    P       T  + L         +  +P  + +AL  L+ N  RH
Sbjct: 382 VDLNALLDQVIGELSPLRPQVNVTRGICLSSVHWDDAWVDAEPRYLHRALQNLVSNAMRH 441

Query: 264 ATPGNVNVHLSTRDGVHYLRVRDDGPGIDEDFATHLFEAFQRGENSRSRAQGGSGLGLAV 323
           A  G V +          + V DDGPG+ E     +F  F R ++SR+RA GG GLGL++
Sbjct: 442 AQ-GQVLISYQVGQVRCRIDVEDDGPGVPESAWERIFTPFLRLDDSRTRASGGHGLGLSI 500

Query: 324 VRAIAIAHGGAVTCRKMEN-GGTLFELSW 351
           VR I   HGG     K  N GG  F LSW
Sbjct: 501 VRRIIYWHGGRALIGKSNNLGGACFSLSW 529