Pairwise Alignments

Query, 299 a.a., glycine/betaine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 295 a.a., glycine betaine ABC transporter substrate-binding protein from Methanococcus maripaludis S2

 Score =  157 bits (398), Expect = 2e-43
 Identities = 98/289 (33%), Positives = 157/289 (54%), Gaps = 18/289 (6%)

Query: 14  YLLGLALGASAAV-----TQAEEKPPVRIGWVNWSDTEITVKLASTALQEHLKQSVKLVM 68
           +LLGLA+  S  V     T   EK  ++ G   W    +   +    L+E    +V+L  
Sbjct: 10  FLLGLAVMFSGCVQSPQSTDDTEKGTIKFGLPPWPGVTVKSNVVKVILEEQ-GYNVELNQ 68

Query: 69  ADIGIQFQALANGNIDLIPMVWLPSTHKAFYDKYKDRLEDLGV-LYEGRIGMAVPTSVPV 127
            D GI +  LA+G++D+    WLP+TH+ ++ +Y ++LE + V + +  +G+AVPT    
Sbjct: 69  LDAGITYAKLADGDLDVSLAGWLPTTHEEYWTQYGNQLEMVHVNVGKTALGLAVPTYTYE 128

Query: 128 AEVASVEDLNKPGIREKFDGKILTSEVGNGQYTLTVKAIEDYKLTGYKLVGSSESGMLNE 187
           A + S+ DLN  G  E FDGKI+  E G G  + T KAI+ Y L+GY+L  SS   M+ E
Sbjct: 129 AGIQSITDLN--GNEELFDGKIIGIEPGAGIMSNTEKAIDSYSLSGYELQSSSTPAMMAE 186

Query: 188 MDRNLKRDKWSLVNAWSPHWMFSKWSLRYLEDPKQIFGGAEQIHAMARKGFSQEHPEVAY 247
           + R +  D+  +V  W PH +F K+ ++ L+DP++++G  ++++ +AR  F  ++PEV  
Sbjct: 187 LARAINEDENIVVTVWEPHSVFFKFDIKMLDDPEKVYGDGDKVYTIARTDFKDDYPEVYE 246

Query: 248 FFAHFSL-PQADLEALMMQARESTADKAVAAYYAANKARFEGMFNPELV 295
           FF  F + P    E +   + E    + VA  + AN        NPELV
Sbjct: 247 FFQKFEVDPSVQSEWIYKYSDEGMDPEEVAEEWVAN--------NPELV 287