Pairwise Alignments

Query, 607 a.a., excinuclease ABC subunit C from Pseudomonas simiae WCS417

Subject, 674 a.a., excinuclease ABC subunit C from Sinorhizobium meliloti 1021

 Score =  451 bits (1161), Expect = e-131
 Identities = 250/619 (40%), Positives = 361/619 (58%), Gaps = 24/619 (3%)

Query: 9   AFLSTCSGRPGVYRMFDSEARLLYVGKAKNLKNRLASYFRKSGLAPKTAALVARIAQVET 68
           AF+      PGVYRM +    +LYVGKA++LK R+++Y +  G + + A +V   A +E 
Sbjct: 57  AFVKRLPNGPGVYRMLNEAGDVLYVGKARSLKKRVSNYAQGRGHSNRIARMVRETAHMEF 116

Query: 69  TITANETEALLLEQTLIKEWRPPYNILLRDDKSYPYVFLS-DGNFPRLSIHRGAKKQKGK 127
             T  E EALLLE  LIK  RP +N+LLRDDKS+PY+ ++ D   P L  HRGA+ +KG 
Sbjct: 117 VTTRTEIEALLLEANLIKRLRPRFNVLLRDDKSFPYIVVTGDTRAPALYKHRGARSRKGD 176

Query: 128 YFGPYPSAGAIRESLSLLQKTFFVRQCEDSFYKNRTRPCLQYQIKRCKAPCVGLVEPAEY 187
           YFGP+ SAGA+  +++ LQ+ F +R C DS ++ RTRPCL YQIKRC APC   V  A+Y
Sbjct: 177 YFGPFASAGAVGRTINSLQRAFLLRTCTDSVFETRTRPCLLYQIKRCSAPCTNEVSDADY 236

Query: 188 AEDVRHSVMFLEGRSNALTDELSGAMEQAASTLDFERAAELRDQISLLRRVQDQQSME-G 246
           AE V  +  FL G+S A+   ++ AM +A+  LDFERAA  RD+++ L  VQ  Q +   
Sbjct: 237 AELVSEAKDFLSGKSQAVKATIASAMAEASENLDFERAALYRDRLAALSHVQSHQGINPA 296

Query: 247 GTGDVDVIAAFVNPGGACVHLISVRGGRVLGSKNFFPQTGIDEDVAEVMAAFLGQYYVSS 306
           G  + DV A     G +C+ +   R G+  G++ +FP+       AEV++AFL Q+Y   
Sbjct: 297 GVEEADVFATHHEGGISCIQVFFFRTGQNWGNRAYFPKADPSIPPAEVLSAFLAQFYDDK 356

Query: 307 PERDLPSELIVNVVHEDFPTLIEAIHELRGRELDISHRVRGTRARWQQLAVTNAEQALSA 366
           P    P ++++    E+   L +A+ E  G ++ I    RG +    + A+ NA +A   
Sbjct: 357 P---CPRQVLLCAPVEEQELLAQALSEKSGYKVSILVPQRGEKKDLVEHALANAREAHGR 413

Query: 367 RLANRQHVAARFDALAEVLNLDEPPQRLECYDISHSSGEATVASCVVFGPEGPIKSDYRR 426
           +LA         +  A    L   P+R+E YD SH  G   V   VV GPEG +K  YR+
Sbjct: 414 KLAETASQGRLLEGFAATFQLPYVPRRIEIYDNSHIMGTNAVGGMVVAGPEGFVKGQYRK 473

Query: 427 YNIEG--VTAGDDYAAMHQALTRRFSKLKDGEGK---------------LPDILLVDGGK 469
           +NI+   +T GDD+  M + +TRRFS+L   EGK                PD++L+DGG+
Sbjct: 474 FNIKSTDITPGDDFGMMREVMTRRFSRLLKEEGKPDRSAEPGEDAGFPAWPDVILIDGGQ 533

Query: 470 GQLSMARDVLNELAVPDLI-LLGVAKGATRKAGFETLYLNDAAHEFTLKGDSPALHLIQQ 528
           GQ++  R +L EL + D +  +GVAKG  R AG E  +  +    FTL    P L+ IQ+
Sbjct: 534 GQMTAVRTILKELGIEDCVTAIGVAKGVDRDAGRERFFA-EGRESFTLPPRDPVLYFIQR 592

Query: 529 IRDEAHRFAITGHRARRGKTRRTSTLEGVAGVGPTRRRDLLKHFGGLQELSRASIDEIAK 588
           +RDEAHRFAI  HRARR K    + L+ +AG+GPTR+R LL HFG  + +SRA I+++  
Sbjct: 593 LRDEAHRFAIGSHRARRKKEMVKNPLDEIAGIGPTRKRALLTHFGTAKAVSRAGINDLMS 652

Query: 589 APGISKKLAELIYANLHSE 607
             GIS+ +A ++Y + H +
Sbjct: 653 VNGISETVARIVYEHFHED 671