Pairwise Alignments

Query, 607 a.a., excinuclease ABC subunit C from Pseudomonas simiae WCS417

Subject, 618 a.a., excinuclease ABC subunit UvrC from Rahnella sp. WP5

 Score =  608 bits (1568), Expect = e-178
 Identities = 312/603 (51%), Positives = 417/603 (69%), Gaps = 8/603 (1%)

Query: 5   FDPSAFLSTCSGRPGVYRMFDSEARLLYVGKAKNLKNRLASYFRKSGLAPKTAALVARIA 64
           FDP AFL T + +PGVYRM+D+   ++YVGKAK+LK RL+SYFR    + KT  LV  IA
Sbjct: 13  FDPKAFLKTVTSQPGVYRMYDASGTVIYVGKAKDLKKRLSSYFRVQVSSRKTETLVKNIA 72

Query: 65  QVETTITANETEALLLEQTLIKEWRPPYNILLRDDKSYPYVFLSDGNFPRLSIHRGAKKQ 124
           Q++ T+T  ETEALLLE   IK ++P YN+LLRDDKSYP +FLS  N PRLS+HRGAK  
Sbjct: 73  QIDVTVTHTETEALLLEHNYIKLYQPRYNVLLRDDKSYPQIFLSADNHPRLSVHRGAKHA 132

Query: 125 KGKYFGPYPSAGAIRESLSLLQKTFFVRQCEDSFYKNRTRPCLQYQIKRCKAPCV-GLVE 183
           KG+YFGP+P++ A+RE+L+LLQK F +RQCE+S Y NR+RPCLQYQI RC  PCV GLV 
Sbjct: 133 KGEYFGPFPNSYAVRETLALLQKLFPIRQCENSVYSNRSRPCLQYQIGRCLGPCVKGLVS 192

Query: 184 PAEYAEDVRHSVMFLEGRSNALTDELSGAMEQAASTLDFERAAELRDQISLLRRVQDQQS 243
             +Y + V +  +FL G+   +  +L   ME+A+  L FE A  +RDQI  +RRV ++Q 
Sbjct: 193 EEDYKDQVEYVRLFLSGKDQQVVTQLVNRMEEASKALRFEDAGRIRDQIQAVRRVTERQF 252

Query: 244 MEGGTGDVDVIAAFVNPGGACVHLISVRGGRVLGSKNFFPQTGIDEDVAEVMAAFLGQYY 303
           + G + D+DVI      G AC+H++ +R G+VLGS+++FP+     D+ EV+  F+GQ+Y
Sbjct: 253 VSGNSEDLDVIGVGFESGMACLHVLFIRQGKVLGSRSYFPKVPGGTDLGEVVQTFVGQFY 312

Query: 304 V-SSPERDLPSELIVNVVHEDFPTLIEAIHELRGRELDISHRVRGTRARWQQLAVTNAEQ 362
           +  S +R LP E++++    +   L +++ EL GR++ I  + RG RAR+ +LA TNA  
Sbjct: 313 LQGSQQRTLPGEILLDFSLAEKDLLADSLSELAGRKVQIQSKPRGDRARYLKLARTNASA 372

Query: 363 ALSARLANRQHVAARFDALAEVLNLDEPPQRLECYDISHSSGEATVASCVVFGPEGPIKS 422
           AL+ +LA +  +  R   LA+ LNL E   R+EC+DISH+ GE TVASCVVF   GP++S
Sbjct: 373 ALTTKLAQQSTIHQRLSELAKTLNLAE-INRMECFDISHTMGEQTVASCVVFDGNGPVRS 431

Query: 423 DYRRYNIEGVTAGDDYAAMHQALTRRFSKLKDGEGKLPDILLVDGGKGQLSMARDVLNEL 482
           +YRRYNI G+T GDDYAAM Q L RR+ K  D + K+PD++ +DGGKGQL MA DV + L
Sbjct: 432 EYRRYNITGITPGDDYAAMAQVLQRRYGKTLD-DNKIPDVIFIDGGKGQLGMALDVFHSL 490

Query: 483 AV----PDLILLGVAKGATRKAGFETLYLNDAAHEFTLKGDSPALHLIQQIRDEAHRFAI 538
            V       +L+G+AKGA RKAG ETL+         L  DSPALH+IQ IRD++H  AI
Sbjct: 491 NVEWDKSKPLLIGIAKGADRKAGLETLFFVPEGEGIALPADSPALHVIQHIRDDSHNHAI 550

Query: 539 TGHRARRGKTRRTSTLEGVAGVGPTRRRDLLKHFGGLQELSRASIDEIAKAPGISKKLAE 598
           TGHR RR K R TS LE + GVGP RR+ LLK+ GG+Q L  AS++EIA+ PGIS  LAE
Sbjct: 551 TGHRQRRAKVRTTSALEEIEGVGPKRRQVLLKYMGGIQPLLNASVEEIAQVPGISIALAE 610

Query: 599 LIY 601
            I+
Sbjct: 611 KIH 613