Pairwise Alignments

Query, 607 a.a., excinuclease ABC subunit C from Pseudomonas simiae WCS417

Subject, 657 a.a., excinuclease ABC subunit UvrC from Ralstonia sp. UNC404CL21Col

 Score =  531 bits (1369), Expect = e-155
 Identities = 291/635 (45%), Positives = 403/635 (63%), Gaps = 39/635 (6%)

Query: 5   FDPSAFLSTCSGRPGVYRMFDSEARLLYVGKAKNLKNRLASYFRKSGLAPKTAALVARIA 64
           FD  A ++     PGVYR FD++  +LYVGKA++LK R++SYF K+ L+P+ A +VA+IA
Sbjct: 28  FDAKAHIARLPNLPGVYRYFDAQGNVLYVGKARDLKKRVSSYFNKTLLSPRIAMMVAKIA 87

Query: 65  QVETTITANETEALLLEQTLIKEWRPPYNILLRDDKSYPYVFLSDGNFPRLSIHRGAKKQ 124
           +++TT+  +E EALLLE  LIK   P YNIL RDDKSYPY+ L+   +PR++ +RGA  +
Sbjct: 88  RIDTTVVRSEAEALLLENNLIKALAPRYNILFRDDKSYPYLKLTHHAYPRMAYYRGATDR 147

Query: 125 KGKYFGPYPSAGAIRESLSLLQKTFFVRQCEDSFYKNRTRPCLQYQIKRCKAPCVGLVEP 184
           K +YFGP+PSA A+RES+ +LQK F +R CED+ + NRTRPCL +QI RC  PCV  + P
Sbjct: 148 KHQYFGPFPSAHAVRESMQILQKVFQLRTCEDTVFNNRTRPCLLHQIHRCSGPCVQAISP 207

Query: 185 AEYAEDVRHSVMFLEGRSNALTDELSGAMEQAASTLDFERAAELRDQISLLRRVQDQQSM 244
            +YA DV ++  FL+GR + +   L   M++ + +L FE+AA +RDQI  L  V  QQS+
Sbjct: 208 EDYARDVANAAGFLQGRQDEVMQTLQDKMQRYSESLAFEQAAIVRDQIGALSTVLKQQSV 267

Query: 245 E--GGTGDVDVIAAFVNPGGACVHLISVRGGRVLGSKNFFPQ--------TGIDED---- 290
           E  G   D+D++A  +  G ACV+L  VRGGR LG K +FP          G+D +    
Sbjct: 268 EEVGHASDIDILAVAIKGGHACVNLAMVRGGRHLGDKAYFPTHVEEGAAIVGVDVEAGGD 327

Query: 291 ------------VAEVMAAFLGQYYVSSPERDLPSELIVNVVHEDFPT-LIEAIHELRGR 337
                        ++++ AF+ Q+Y+   ++ +P  L+V+  H+   T LI+A+ E  GR
Sbjct: 328 PAAETSRDAERMASDILEAFVAQHYL---DQFVPPVLVVS--HQIHATELIDALAEQAGR 382

Query: 338 ELDISHRVRGTRARWQQLAVTNAEQALSARLANRQHVAARFDALAEVLNL---DEPPQRL 394
            + +  + +G R  W ++A   AE +L  RL+ +    AR  ALAE + +   D    R+
Sbjct: 383 RISVVRQPQGGRRAWLEMAEKGAELSLMRRLSEQGSQQARTRALAETIGIDLEDLAALRV 442

Query: 395 ECYDISHSSGEATVASCVVFGPEGPIKSDYRRYNIEGVTAGDDYAAMHQALTRRFSKLKD 454
           EC+DISH++GEAT ASCVVF       S+YRRYNI+ +T GDDYAAM Q LTRR+ K+ +
Sbjct: 443 ECFDISHTAGEATQASCVVFHSHAMQNSEYRRYNIQDITPGDDYAAMRQVLTRRYQKIVE 502

Query: 455 GEGK----LPDILLVDGGKGQLSMARDVLNELAVPDLILLGVAKGATRKAGFETLYLNDA 510
             G+    +P I+L+DGGKGQ+ +AR V  EL +   +L+GVAKG  RK G ETL   D 
Sbjct: 503 QAGEDTPNMPSIVLIDGGKGQVEVARQVFEELGLDIGLLVGVAKGEGRKVGLETLIFADG 562

Query: 511 AHEFTLKGDSPALHLIQQIRDEAHRFAITGHRARRGKTRRTSTLEGVAGVGPTRRRDLLK 570
                L   S AL L+ QIRDEAHRFAITG RA+R K R TS LE + G+G  RR+ LL 
Sbjct: 563 RPSLELGQGSAALMLVAQIRDEAHRFAITGMRAKRAKARNTSRLEEIEGIGAKRRQRLLA 622

Query: 571 HFGGLQELSRASIDEIAKAPGISKKLAELIYANLH 605
            FGGL+ +  AS+DE+A   GIS+ LAE IY  LH
Sbjct: 623 RFGGLRGVMAASVDELATVEGISQTLAEEIYRQLH 657