Pairwise Alignments

Query, 607 a.a., excinuclease ABC subunit C from Pseudomonas simiae WCS417

Subject, 731 a.a., UvrABC system protein C from Burkholderia phytofirmans PsJN

 Score =  283 bits (723), Expect = 2e-80
 Identities = 148/306 (48%), Positives = 199/306 (65%), Gaps = 11/306 (3%)

Query: 5   FDPSAFLSTCSGRPGVYRMFDSEARLLYVGKAKNLKNRLASYFRKSGLAPKTAALVARIA 64
           F+P   L+     PGVYR +D+   +LYVGKA++LK R++SYF K+ L+P+ A +V RIA
Sbjct: 10  FEPKKVLAQLPHLPGVYRYYDTHGAVLYVGKARDLKKRVSSYFTKTLLSPRIAMMVTRIA 69

Query: 65  QVETTITANETEALLLEQTLIKEWRPPYNILLRDDKSYPYVFLSDGNFPRLSIHRGAKKQ 124
           ++ETT+T +E EALLLE  LIK   P YNIL RDDKSYPY+ L+   FPR++ +RGA  +
Sbjct: 70  RIETTVTRSEAEALLLENNLIKALAPRYNILFRDDKSYPYLKLTGHKFPRMAYYRGAVDR 129

Query: 125 KGKYFGPYPSAGAIRESLSLLQKTFFVRQCEDSFYKNRTRPCLQYQIKRCKAPCVGLVEP 184
           K +YFGP+PSA A+RES+ +LQ+ F +R CEDS + NRTRPCL +QI RC APCV  +  
Sbjct: 130 KNQYFGPFPSAWAVRESIQILQRVFQLRTCEDSVFNNRTRPCLLHQIGRCTAPCVAAINE 189

Query: 185 AEYAEDVRHSVMFLEGRSNALTDELSGAMEQAASTLDFERAAELRDQISLLRRVQDQQSM 244
            +YA DV ++  FL GR   +  EL   M   AS L FE+AA +R+Q+S L  V  QQ++
Sbjct: 190 EDYARDVANASRFLLGRQGEVMKELEQKMHAFASELKFEQAAAVRNQMSSLSTVLHQQAI 249

Query: 245 E-GGTGDVDVIAAFVNPGGACVHLISVRGGRVLGSKNFFP----------QTGIDEDVAE 293
           E G   DVD++A     G  CV+L  VRGGR LG K +FP          + G+ ED A 
Sbjct: 250 EVGSDSDVDILAVVALGGRVCVNLAMVRGGRHLGDKAYFPAHVESALTADEGGLQEDDAA 309

Query: 294 VMAAFL 299
           + +  L
Sbjct: 310 LASVAL 315



 Score =  244 bits (624), Expect = 7e-69
 Identities = 148/349 (42%), Positives = 200/349 (57%), Gaps = 39/349 (11%)

Query: 292 AEVMAAFLGQYYVSSPERDLPSELIVNVVHEDFPTLIEAIHELRGRELDISHRVRGTRAR 351
           AEV+ AF+ Q+Y+ +    +P  L+V+    +   L++ + E  G ++ +  + +G R  
Sbjct: 387 AEVLEAFIAQHYLGNR---VPPVLVVSHAPAN-RELVDVLIEQAGHKVTVLRQPQGQRRA 442

Query: 352 WQQLAVTNAEQALSARLANRQHVAARFDALAEVLNL---DEPPQRLECYDISHSSGEATV 408
           W  +A  NA  AL+  L+ +    AR  AL + L +   D    R+EC+DISH+ GEAT 
Sbjct: 443 WLTMAEQNARLALARLLSEQGSQQARTRALTDTLGMECDDLAHLRIECFDISHTMGEATQ 502

Query: 409 ASCVVFGPEGPIKSDYRRYNIEGVTAGDDYAAMHQALTRRFSKLKD-------------- 454
           ASCVV+       S+YRRYNI G+T GDDYAAM Q LTRR+ K+ +              
Sbjct: 503 ASCVVYHHHKMQSSEYRRYNITGITPGDDYAAMRQVLTRRYEKMVEQAAANAADEAAELQ 562

Query: 455 ------------------GEGKLPDILLVDGGKGQLSMARDVLNELAVPDLILLGVAKGA 496
                               G LP I+L+DGGKGQ+ +AR V  EL +   +L+GVAKG 
Sbjct: 563 SDAAADPSLTPDAAEPVAAGGILPTIVLIDGGKGQVEIARQVFTELGLDTGMLVGVAKGE 622

Query: 497 TRKAGFETLYLNDAAHEFTLKGDSPALHLIQQIRDEAHRFAITGHRARRGKTRRTSTLEG 556
            RK G ETL   D      L  +S AL L+ QIRDEAHRFAITG RA+RGKTR+TS LE 
Sbjct: 623 GRKVGLETLIFADGRAPLELGKESAALMLVAQIRDEAHRFAITGMRAKRGKTRQTSRLEE 682

Query: 557 VAGVGPTRRRDLLKHFGGLQELSRASIDEIAKAPGISKKLAELIYANLH 605
           + GVG  RR+ LL  FGGL+ +  AS++++A   GIS+ LAE IY  LH
Sbjct: 683 LEGVGAKRRQRLLARFGGLRGVVAASVEDLASVEGISQALAEQIYRQLH 731