Pairwise Alignments

Query, 213 a.a., chemotaxis protein CheY from Pseudomonas simiae WCS417

Subject, 216 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  120 bits (300), Expect = 2e-32
 Identities = 77/210 (36%), Positives = 116/210 (55%), Gaps = 3/210 (1%)

Query: 2   IRVLVVDDHDLVRTGITRMLADIDGLQVVGQAESGEESLIKARELKPDVVLMDVKMPGIG 61
           IRV++VDDH +V  G    L     ++VV  A +G E+L   +  +PDVVLMDV MP + 
Sbjct: 9   IRVVMVDDHQVVLDGFIARLEQEPEIEVVATASNGLEALELVKLHQPDVVLMDVSMPIMN 68

Query: 62  GLGATTKLLRSHPDIKVVVVTVCEEDPFPTRLLQAGAAGYLTKGAGLAEMVQAIRLVFAG 121
           G+ AT  +    P  KV+++T+ +   +  +++QAGA GY+ K     +MVQAI+ V  G
Sbjct: 69  GIEATRLIKEEVPHTKVLMLTMHDNREYIMQVMQAGAMGYMLKEISALKMVQAIKTVHQG 128

Query: 122 QRYISPQIAQQLAIKSFQPVSDSPFDVLSEREIQIALMIV-GCQKVQTISDKLCLSPKTV 180
             Y        L  +   PV++ P + LS RE  I  M+  GC   + I+  L +S +TV
Sbjct: 129 ATYFCESTTSTLFSQEILPVANKP-NPLSRREEAILRMVAQGCSS-KKIATLLNISYRTV 186

Query: 181 NTYRYRIFEKLAISSDVELTLLAVRHGMVD 210
            T+R  I  KL I S  EL   A++HG+++
Sbjct: 187 ETHRQNIKHKLDIHSTAELAQYALQHGLLE 216