Pairwise Alignments

Query, 371 a.a., ABC transporter from Pseudomonas simiae WCS417

Subject, 336 a.a., methionine ABC transporter ATP-binding protein from Herbaspirillum seropedicae SmR1

 Score =  300 bits (769), Expect = 3e-86
 Identities = 177/340 (52%), Positives = 228/340 (67%), Gaps = 10/340 (2%)

Query: 32  VRFINLGKTYDG---TVHALQGIDLAIQRGEVFGIIGRSGAGKSSLIRTINRLEQPSSGR 88
           +R   L KTY      + AL+ I+L I +GEVFGIIGRSGAGKS+LIRT+N LE+P SGR
Sbjct: 2   IRIEQLHKTYRAGQRDIIALRDINLDIAQGEVFGIIGRSGAGKSTLIRTLNVLERPDSGR 61

Query: 89  VLIDQVDIGAFDEDRLVALRRRIGMIFQHFNLMSAKTVWQNVELPLKVAG-IPKLQREQK 147
           VLID  DI     + L+ LR+R+GM+FQHFNL++AKTV QN++ PLK+ G   + +R  +
Sbjct: 62  VLIDGEDITGLGHEALLGLRQRVGMVFQHFNLLNAKTVAQNIDWPLKITGRYSREERAAR 121

Query: 148 VRELLELVGLKDKHKAYPAQLSGGQKQRVGIARSLVHDPEILLCDEATSALDPETTQSIL 207
           V ELL+LVGL      YP+QLSGGQKQRVGIAR+L + P +LLCDEATSALDPETTQSIL
Sbjct: 122 VDELLQLVGLDAHRDQYPSQLSGGQKQRVGIARALANHPRLLLCDEATSALDPETTQSIL 181

Query: 208 GLLREINQRLGLTIVLITHEMAVIREICDRVVVLEHGRIVEQGPVWQVFGDPQHAVSKTL 267
            LL EIN++LGLTIVLITHEM VIR ICDRV VL+ G + EQG V  +F  PQHAV+++L
Sbjct: 182 RLLLEINRKLGLTIVLITHEMEVIRSICDRVAVLDGGAVAEQGRVVDIFLRPQHAVTRSL 241

Query: 268 LAPLQHGLPEELQSRLQARPATADAAVVLRLQFTGSDTDEPDLAALFSALGGRVRLLQGG 327
           L   Q    +  +S  Q RP   D  +V RL + G    +P L+ L +A      +++G 
Sbjct: 242 LT--QSHAWDAGESLYQRRP---DGKLV-RLTYAGDIAAQPILSQLTAATSALATIVRGT 295

Query: 328 VERIQGHALGQLLLAVNGSPHTAEELRNRAGNWAQQVEVL 367
           V RI+    GQLL+  +G      ++ +R      + EVL
Sbjct: 296 VSRIKDTPYGQLLVEFSGDADALAQVLDRLQTSDIEHEVL 335