Pairwise Alignments

Query, 1204 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 940 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  211 bits (538), Expect = 2e-58
 Identities = 162/533 (30%), Positives = 250/533 (46%), Gaps = 44/533 (8%)

Query: 578  RFMSVLIDGTPHPIYVRDRQGRLMACNNAYLDVFGFKLEDVIGKTVVQTDTGNPPQAQSF 637
            R    ++  +   I  +   G + + N    ++FG+   +++G++ +      PP+  + 
Sbjct: 413  RQYEAIVRSSDDAILSKTLDGIVTSWNRGAEELFGYSAAEMVGRSTLHLF---PPECLAE 469

Query: 638  HADYLSLMERGEPQIQDRVLKV-PGGGVLTIYQWMLPYRDSNGAVVGMIAGWVDVS---- 692
              D L  + RGE        ++   G ++ +   + P  D  G V+G+     D++    
Sbjct: 470  ERDILERLRRGETVKHFDTRRIRKDGRIVDVSVTISPLLDGEGRVLGISKIARDITARKA 529

Query: 693  -------ERQRL-------LGQLQEAKEEADAANRAKTTFLATMSHEIRTPMNAVIGMIE 738
                    RQRL         QL+E K+ A++AN AK+ FLA MSHEIRTP+NA+ G+  
Sbjct: 530  AEAELQRHRQRLEELVQERTRQLEELKDAAESANVAKSAFLANMSHEIRTPLNAMTGLTH 589

Query: 739  LAQKNA--EQGRVDQDALEVASMASRSMLELIGDILDIARIETGHLSLSLEQANLHELLA 796
            L ++     Q     D LE A+   + +L +I  ILD+++IE G  +L      +  LL 
Sbjct: 590  LIRRAGLKPQQAEHMDKLEAAA---QHLLGVINAILDLSKIEAGKFALEEAPVRVESLLG 646

Query: 797  SVARVFEGLARDKGLLLQVELDPMIDRAVLIDPLRFKQVVSNLLGNAIKFTATGQVRLGA 856
            +VA   +   + KGL+L+ E  P+    +L DP R +Q + N  GNA+KFT  G + L  
Sbjct: 647  NVASFLQERVQAKGLVLRTEAQPLPPH-LLGDPTRLQQALLNYAGNALKFTEQGSITLRV 705

Query: 857  QSTPTLAGDHLSLRLCVEDTGIGISAEDQQRLFSPFIQGSNNDQSARSGSGLGLVISRNL 916
             +      D L LR  V+DTGIGI  E   +LFS F Q  N+      G+GLGL I+R L
Sbjct: 706  HTLEEGEADAL-LRFEVQDTGIGIPPEAMHKLFSAFEQADNSTTRRYGGTGLGLAITRKL 764

Query: 917  CEMMGGQLHLSSVLGKGTRVDLTLTLATATATPVYAPAPPAPATHA----------LNLL 966
             ++MGG+   SS  G+G+    T  L        Y    P    +A            +L
Sbjct: 765  AQLMGGEAGASSEPGRGSTFWFTARLKKGKER--YGNGAPLAGGNAEQRLRQEFAGRTVL 822

Query: 967  VVDDYPANRLLLARQLSFLGHRIVTAEDGAEGFALWQDGQFDGVITDSNMPIMDGYTLAR 1026
            + +D P N+ +    L  +G R+  A DG       +   +  ++ D  MP+MDG    R
Sbjct: 823  LAEDEPINQEITKFMLEDVGLRVELAPDGKVAVERARGNDYALILMDMQMPLMDGLDATR 882

Query: 1027 DIRAQERQRGLVPCLLLGFTANAQPEETERCRQAGMDGCLFKPTGLDDLRTAL 1079
            +IR  +R R      +L  TANA  E+  RC  AGM+  + KP   D L   L
Sbjct: 883  EIRQLQRHR---QTPILAMTANAFAEDKARCLGAGMNDFIAKPVNPDVLYATL 932