Pairwise Alignments

Query, 1204 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 900 a.a., PAS-family sensor histidine kinase from Caulobacter crescentus NA1000

 Score =  241 bits (615), Expect = 2e-67
 Identities = 162/428 (37%), Positives = 228/428 (53%), Gaps = 17/428 (3%)

Query: 647  RGEPQIQDRVLKVPGGGVLTIYQWMLPYRDSNGAVVGMIAGWVDVSERQRLLGQLQEAKE 706
            R  PQ  +  L  PGG       +    RD  G  +  +   +D+ E+++    L EA+ 
Sbjct: 460  RRTPQEHEVRLLSPGGEARWARVFHEVRRDGQGKALKAVGLILDIDEKKKAELALIEAER 519

Query: 707  EADAANRAKTTFLATMSHEIRTPMNAVIGMIELAQKNAEQGRVDQDALEVASMASRSMLE 766
             A AAN AK  FLA MSHEIRTPMN V+G++ + ++    G  D  +L   ++A+  ML 
Sbjct: 520  AAQAANEAKAQFLANMSHEIRTPMNGVLGVMHVLKRELPPG--DSASLLNEALAAGQMLS 577

Query: 767  -LIGDILDIARIETGHLSLSLEQANLHELLASVARVFEGLARDKGLLLQVELDPMIDRAV 825
             L+ D++DI+RIE G L L+ E  +  +L+  VAR+    A  KGL L+++L   +   +
Sbjct: 578  TLLDDVIDISRIEAGRLDLNHEPVDPRDLVRGVARLLATQAAHKGLRLELDLPDDLGW-I 636

Query: 826  LIDPLRFKQVVSNLLGNAIKFTATGQVRLGAQSTPTLAGDHLSLRLCVEDTGIGISAEDQ 885
              DP R +Q + NL+GNA+KFT  G V + AQ   T AG +L   +   DTG+G+  E Q
Sbjct: 637  ETDPTRVRQALFNLIGNAVKFTLKGSVTVRAQRRITDAGPYLVFDII--DTGVGVPLEAQ 694

Query: 886  QRLFSPFIQGSNNDQSARSGSGLGLVISRNLCEMMGGQLHLSSVLGKGTRVDLTLTLATA 945
            +RLF  F Q          GSGLGL I+R L  M+GG++   SV G+G+   LT+     
Sbjct: 695  KRLFERFQQADAGTTRRFGGSGLGLAITRKLARMLGGEVSFRSVPGEGSTFSLTIA---- 750

Query: 946  TATPVYAPAPPAPATH----ALNLLVVDDYPANRLLLARQLSFLGHRIVTAEDGAEGFAL 1001
             A PV  P+  A  T     +L +LVV+D P N+L+  R L  LG  +  A+DGA G   
Sbjct: 751  -APPVGPPSAQAGETSELLTSLKVLVVEDNPTNQLVARRILEQLGAEVSVADDGAAGVEA 809

Query: 1002 WQDGQFDGVITDSNMPIMDGYTLARDIRAQERQRGLVPCLLLGFTANAQPEETERCRQAG 1061
             + G+FD ++ D  MP MDG   AR IRA     G  P  ++  TAN    +    R AG
Sbjct: 810  AERGRFDLILMDVQMPGMDGLEAARRIRALPGPAGRAP--IIALTANVMAHQRAAYRAAG 867

Query: 1062 MDGCLFKP 1069
            MDG   KP
Sbjct: 868  MDGVAAKP 875



 Score = 38.5 bits (88), Expect = 3e-06
 Identities = 36/129 (27%), Positives = 59/129 (45%), Gaps = 16/129 (12%)

Query: 583 LIDGTPHPIYVRDRQGRLMACNNAYLDVFGFKLEDVIGKTVVQTDTGNPPQAQSFHADYL 642
           LI+  P  + V D   RL   +  +L++F      VIGKT+ +   G   +  +  A  L
Sbjct: 270 LIEDAPFAVAVYDVDMRLRMVSPRFLEIFRSTEAQVIGKTLTELTNGTRRRFVNRVARAL 329

Query: 643 S--LMERGEPQIQDRVLKVPGGGVLTIYQW-MLPYRDSNGAVVGMIAGWVDVSERQRLLG 699
           S  ++ R E ++ D        GV   ++W   P+RD  G +VG+I    +++       
Sbjct: 330 SGEVVTRREDRLYD------AEGVERAFRWEARPWRDVAGEIVGVITYMDEIT------- 376

Query: 700 QLQEAKEEA 708
            L EA+ EA
Sbjct: 377 ALTEARREA 385