Pairwise Alignments

Query, 208 a.a., LuxR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 217 a.a., Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain from Pseudomonas stutzeri RCH2

 Score =  105 bits (263), Expect = 5e-28
 Identities = 62/213 (29%), Positives = 120/213 (56%), Gaps = 5/213 (2%)

Query: 1   MSKAL-IVDDHPFIRATVKYLLK-QEGFDEIYEAGNGADAMQLARERRPDLIILDLAMPK 58
           MSK + +VDDH  +RA ++ L++ Q G++ + E G+G D   + R+ RPD+++LDL+M  
Sbjct: 1   MSKRVALVDDHALVRAGLRALVEDQPGYEVVAEGGDGQDVEAILRQARPDILLLDLSMKH 60

Query: 59  LGGLEVISRIKALELPCKILVLTSYLAVFFSTRCMRAGAMGFVAKTGELDELQKAIRAIR 118
           +GGL+ + +        ++L+L+ +    +    +R GA G++ K     EL  A++A+ 
Sbjct: 61  MGGLDALRQWHGQYPDVQVLILSMHATADYVLAALRLGARGYLLKDAAAQELDMALQALS 120

Query: 119 SGYSCF-PSVATSSVRRDDLQ--TTEQELVNSLSDREVTVLQRLATGLTNKEIAEDMLLS 175
              S   P +A + +    ++  + E  L   L+ R++ +L+ +A G++ ++IA  + LS
Sbjct: 121 RNESYLSPGIAQTVISSAIVEGRSRETSLAPVLTPRQIEILRLIARGVSTRDIAAGLGLS 180

Query: 176 HKTISTYKTRLKEKLRMSSVVHLSKFAQRNHLI 208
            KT+ T++ ++  +L +  V  L  +A R  LI
Sbjct: 181 VKTVDTHRAQIMARLNLHDVPSLVLYAVRQGLI 213