Pairwise Alignments

Query, 208 a.a., LuxR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 214 a.a., DNA-binding response regulator, LuxR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  110 bits (275), Expect = 2e-29
 Identities = 64/209 (30%), Positives = 112/209 (53%), Gaps = 1/209 (0%)

Query: 1   MSKALIVDDHPFIRATVKYLLKQE-GFDEIYEAGNGADAMQLARERRPDLIILDLAMPKL 59
           M    +VDDH  +R  ++ +L+ E G   + EA +G  A+Q AR+   D+I++D+ MP +
Sbjct: 1   MISIYLVDDHELVRTGIRRILEDERGIKVVGEAPDGETAVQWARQNEADVILMDMNMPVM 60

Query: 60  GGLEVISRIKALELPCKILVLTSYLAVFFSTRCMRAGAMGFVAKTGELDELQKAIRAIRS 119
           GGLE   +I   +   KI+VLT +    F ++ M+AGA G++ K     E+ +AIR +  
Sbjct: 61  GGLEATRKILRYQPHAKIIVLTVHTEDPFPSKVMQAGASGYLTKGATPPEVLQAIRQVSR 120

Query: 120 GYSCFPSVATSSVRRDDLQTTEQELVNSLSDREVTVLQRLATGLTNKEIAEDMLLSHKTI 179
           G           +        ++    +LS+RE+ ++  +  G    +I+E + LS KT+
Sbjct: 121 GQRYLSPEIAQQMALSQFNPADENPFKALSERELQIMLMITNGEKVNDISEQLNLSPKTV 180

Query: 180 STYKTRLKEKLRMSSVVHLSKFAQRNHLI 208
           ++Y+ RL  KL +S  V L++ A R  ++
Sbjct: 181 NSYRYRLFAKLGISGDVELTRLAIRYKML 209