Pairwise Alignments

Query, 496 a.a., LuxR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 1013 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score = 62.0 bits (149), Expect = 1e-13
 Identities = 75/318 (23%), Positives = 138/318 (43%), Gaps = 40/318 (12%)

Query: 116 VITDSRGEPELLVLILSDATEWASAEQRFEK---TFNANPAPAVICRLS-DLRYIKVNQG 171
           +ITD++G    +  I  D TE   AE    K   +   +P   VI  L+ ++ Y  VN+ 
Sbjct: 441 LITDAQGRVTHIQGISRDITERKRAEAELRKFLLSAEQSPVSIVITNLAAEIEY--VNEA 498

Query: 172 FLEMTGYNRDQVIGKSVYELDVLEQAERKDLAIQRL------GEGATIPQMQAEL--RLP 223
           F+   GY+R++V+G++     +L+       + + +      GEG      + EL  R  
Sbjct: 499 FVRTAGYSREEVLGQNPR---ILQSGRTPRSSYEEMWRCLSRGEG-----WRGELFNRRK 550

Query: 224 EGGSKLVIVAGQPLDMNEEDCMLFSFM----DLEPRRKAEIALRQSEERFAKSFRLTPVP 279
           +G   L   +  P+   + D  +  ++    D+  RR  E AL +SE++F   +      
Sbjct: 551 DGSEYLEDASINPI--RQPDGSITHYLAVKEDITERRATEAALAESEDKFRTIYDTIGDA 608

Query: 280 TLVCSASNRQVVDINEAFMSITGYTSEELIGKSIEDISFID---SPQAGAQLFTTLEKAG 336
             V   ++  ++D+N     + GY+ +EL+   ++ I+  D    PQA       +++ G
Sbjct: 609 IFVHDVASGSILDVNGGACRMYGYSRKELLSLDVQGITADDPAFPPQAARDYMRRVQEEG 668

Query: 337 NLDGQDLKVRKKGNEVIDCVVSADTVIIEDVPCYLLVMMNITERKRSELELVAAIEEVMQ 396
                +   R         +V+     +      L V+ +I  RKR+E EL  A+ E   
Sbjct: 669 P-QSFEWMARGSSGRQFWVLVNLQIFRLSGGQRVLAVVRDIDGRKRAEQELQQALAE--- 724

Query: 397 DASWFSQTLIEKLANAKS 414
                ++ L ++LA A+S
Sbjct: 725 -----AKALNQRLAEAQS 737



 Score = 49.7 bits (117), Expect = 5e-10
 Identities = 59/273 (21%), Positives = 119/273 (43%), Gaps = 16/273 (5%)

Query: 126 LLVLILSDATEWASAEQRFEKTFNANPAPAVICRLSDLRYIKVNQGFLEMTGYNRDQVIG 185
           LL  + S A +    E RF     +      +  L+  R+  V+     M G   D+ + 
Sbjct: 324 LLGRVFSAALQAREQEARFRLLAESGSDVVWLYELASRRFAYVSPSVQAMRGITVDEALQ 383

Query: 186 KSVYELDVLEQAERKDLAIQR------LGEGATIPQMQAELRLPEGGSKLVIVAGQPLDM 239
           +++ +L   E  +  D  ++R       G+ A   +    ++  + GS +   A   L  
Sbjct: 384 QTMADLLTPECHQHLDGELERWIAAVDTGQEAAASRHYELVQPRKDGSLIQTEAVMTLIT 443

Query: 240 NEEDCMLFS---FMDLEPRRKAEIALRQSEERFAKSFRLTPVPTLVCSASNRQVVDINEA 296
           + +  +        D+  R++AE  LR    +F  S   +PV  ++ + +  ++  +NEA
Sbjct: 444 DAQGRVTHIQGISRDITERKRAEAELR----KFLLSAEQSPVSIVITNLA-AEIEYVNEA 498

Query: 297 FMSITGYTSEELIGKSIEDISFIDSPQAG-AQLFTTLEKAGNLDGQDLKVRKKGNEVI-D 354
           F+   GY+ EE++G++   +    +P++   +++  L +     G+    RK G+E + D
Sbjct: 499 FVRTAGYSREEVLGQNPRILQSGRTPRSSYEEMWRCLSRGEGWRGELFNRRKDGSEYLED 558

Query: 355 CVVSADTVIIEDVPCYLLVMMNITERKRSELEL 387
             ++        +  YL V  +ITER+ +E  L
Sbjct: 559 ASINPIRQPDGSITHYLAVKEDITERRATEAAL 591