Pairwise Alignments

Query, 496 a.a., LuxR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 1037 a.a., sensory box histidine kinase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 98.6 bits (244), Expect = 1e-24
 Identities = 59/182 (32%), Positives = 100/182 (54%), Gaps = 3/182 (1%)

Query: 209 EGATIPQMQAELRLPEGGSKLVIVAGQPLDMNEEDC---MLFSFMDLEPRRKAEIALRQS 265
           EG T+   +A L +P+G  KL+ V   PL +  E     ++ +F D+  RR A+  L+QS
Sbjct: 335 EGLTLTDFEAWLPMPDGTRKLLSVNATPLVVGREQRNHGVVATFEDVTERRMAQERLQQS 394

Query: 266 EERFAKSFRLTPVPTLVCSASNRQVVDINEAFMSITGYTSEELIGKSIEDISFIDSPQAG 325
           E+RFA  FRL+P   ++ S     VVD+N++F  + G   +E++G+S+ DI   D P   
Sbjct: 395 EKRFATLFRLSPDSIVLSSFDTGLVVDVNDSFCQLHGLGRDEVVGRSLRDIGLYDDPAQL 454

Query: 326 AQLFTTLEKAGNLDGQDLKVRKKGNEVIDCVVSADTVIIEDVPCYLLVMMNITERKRSEL 385
             + T + + G +   +L+ R    E +   +S+  ++I +    L V+ ++TER R+E 
Sbjct: 455 DGIITLVREKGRVVDLELRARSLKGEELYLSLSSQLMVIGEANYRLTVVRDMTERYRAEQ 514

Query: 386 EL 387
           EL
Sbjct: 515 EL 516



 Score = 82.8 bits (203), Expect = 5e-20
 Identities = 74/280 (26%), Positives = 130/280 (46%), Gaps = 23/280 (8%)

Query: 122 GEPELLVLILSDATEWASAEQRF-------EKTFNANPAPAVICRLSDLRYIKVNQGFLE 174
           GE    + ++ D TE   AEQ         E   ++ P  ++  + +  R++  N+ F +
Sbjct: 494 GEANYRLTVVRDMTERYRAEQELHEKRLLLEGILDSVPV-SIFWKDAAGRFMGCNRTFAQ 552

Query: 175 MTGYNRDQ-VIGKSVYELDVL-------EQAERKDLAI--QRLGEGATIPQMQAELRLPE 224
           M G +  + VIGK   +L +L        +A+RK +A     LG    +       R+ E
Sbjct: 553 MVGLDTPETVIGKDDADLGLLPGLAETFREADRKVMATLSPMLGYVERLAFADGRERMLE 612

Query: 225 GGSKLVIVAGQPLDMNEEDCMLFSFMDLEPRRKAEIALRQSEERFAKSFRLTPVPTLVCS 284
             SKL ++A     +     +L    D+     A+  LRQSEERF++ FR +P    +  
Sbjct: 613 T-SKLPLLAADGRAVG----VLGLIRDITESLAAQEQLRQSEERFSRLFRYSPEAMALVD 667

Query: 285 ASNRQVVDINEAFMSITGYTSEELIGKSIEDISFIDSPQAGAQLFTTLEKAGNLDGQDLK 344
            ++++  D+N AF  +TGY + EL+G+   +++F       A+L   +   G +D  + +
Sbjct: 668 MADQRFADVNHAFERLTGYEASELVGRGTIEMAFYTDATTRAELLRRIHTEGFVDNYEFE 727

Query: 345 VRKKGNEVIDCVVSADTVIIEDVPCYLLVMMNITERKRSE 384
            R K    + C +S   + I D    L ++ +ITE KR +
Sbjct: 728 GRTKEGTPMPCSISCSILSIGDRRFILGLVRDITEMKRMQ 767



 Score = 54.7 bits (130), Expect = 2e-11
 Identities = 41/181 (22%), Positives = 77/181 (42%), Gaps = 2/181 (1%)

Query: 140 AEQRFEKTFNANPAPAVICRLSDLRYIKVNQGFLEMTGYNRDQVIGKSVYELDVLEQAER 199
           +E+RF   F  +P   V+        + VN  F ++ G  RD+V+G+S+ ++ + +   +
Sbjct: 394 SEKRFATLFRLSPDSIVLSSFDTGLVVDVNDSFCQLHGLGRDEVVGRSLRDIGLYDDPAQ 453

Query: 200 KDLAIQRLGEGATIPQMQAELRLPEGGSKLVIVAGQPLDMNEEDCMLFSFMDLEPRRKAE 259
            D  I  + E   +  ++   R  +G    + ++ Q + + E +  L    D+  R +AE
Sbjct: 454 LDGIITLVREKGRVVDLELRARSLKGEELYLSLSSQLMVIGEANYRLTVVRDMTERYRAE 513

Query: 260 IALRQSEERFAKSFRLTPVPTLVCSASNRQVVDINEAFMSITGY-TSEELIGKSIEDISF 318
             L +            PV      A+ R  +  N  F  + G  T E +IGK   D+  
Sbjct: 514 QELHEKRLLLEGILDSVPVSIFWKDAAGR-FMGCNRTFAQMVGLDTPETVIGKDDADLGL 572

Query: 319 I 319
           +
Sbjct: 573 L 573



 Score = 47.8 bits (112), Expect = 2e-09
 Identities = 26/128 (20%), Positives = 58/128 (45%)

Query: 140 AEQRFEKTFNANPAPAVICRLSDLRYIKVNQGFLEMTGYNRDQVIGKSVYELDVLEQAER 199
           +E+RF + F  +P    +  ++D R+  VN  F  +TGY   +++G+   E+     A  
Sbjct: 648 SEERFSRLFRYSPEAMALVDMADQRFADVNHAFERLTGYEASELVGRGTIEMAFYTDATT 707

Query: 200 KDLAIQRLGEGATIPQMQAELRLPEGGSKLVIVAGQPLDMNEEDCMLFSFMDLEPRRKAE 259
           +   ++R+     +   + E R  EG      ++   L + +   +L    D+   ++ +
Sbjct: 708 RAELLRRIHTEGFVDNYEFEGRTKEGTPMPCSISCSILSIGDRRFILGLVRDITEMKRMQ 767

Query: 260 IALRQSEE 267
             + Q+E+
Sbjct: 768 EVMIQTEK 775