Pairwise Alignments

Query, 619 a.a., cysteine protease from Pseudomonas simiae WCS417

Subject, 673 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 52.8 bits (125), Expect = 5e-11
 Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 3/127 (2%)

Query: 255 PQSAAAVKAVRGLA-PAEQVAALMQHINDHYRYLGDWRATERGYVPFNLDEIEQHGYGDC 313
           P     V +VR +   A+Q+  +++ +    RY G     +  +VP   +++ +  YGDC
Sbjct: 282 PALTKYVNSVRAMGNQAKQIEEIVRFVQQEIRYFGI-EMGQSSHVPHTPNQVFERRYGDC 340

Query: 314 KDLAILLTALLKATGIKAETAWV-SRGDVVESLLIPGTQAPNHAIVRAEVDGQVWWLDPT 372
           KD A L+  LL   GI++  A V +R         P     +H I   E +G+ +W+D T
Sbjct: 341 KDKANLMNFLLSNVGIESYPALVNTRSGRSLPEQQPSGVLFDHVINLVEFNGKHYWIDGT 400

Query: 373 NPVFAPG 379
           N V A G
Sbjct: 401 NHVQAQG 407



 Score = 28.1 bits (61), Expect = 0.001
 Identities = 23/106 (21%), Positives = 38/106 (35%), Gaps = 8/106 (7%)

Query: 153 HYVLKFGPSPARRDRFKARFTAERPLQWRSELFEGFNVSVSQNGKTLD--------VVQK 204
           HY L+F    A     K     E       E  +  ++ V +NG T D        ++ +
Sbjct: 77  HYFLEFAALAANHQGVKELSKLELTFNPAFESMKLHSLQVERNGVTSDRLAKARINIINQ 136

Query: 205 TPTYLNYINEASNAALLRIPRIEVGSALERQAYFGGFAQAYNQILG 250
            P  +N +      A++ +P + VG  L       G    Y +  G
Sbjct: 137 EPELVNDLFHGLATAVVVVPDLRVGDTLRYSYSLEGRNPVYGKQFG 182