Pairwise Alignments

Query, 297 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 297 a.a., transcriptional regulator, LysR family (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  165 bits (418), Expect = 1e-45
 Identities = 99/275 (36%), Positives = 153/275 (55%), Gaps = 4/275 (1%)

Query: 3   DWNDLRYFLELQRSGRLLTAAQRLKTTHATVARHIEAIEKSLGTALFVQHAQGYELTPAG 62
           +W+DLR FL + R   L  AA+ L+   ATV R I  +E+ +G ALF++  QGY+L+ AG
Sbjct: 4   NWDDLRVFLHVARGEGLTAAARTLRLDPATVGRRIARLEEVVGEALFLKSPQGYQLSDAG 63

Query: 63  EALLKHAEAMENVALLAEDELTHSAAPL-GKIRLGVAEGLGVMFLASRMGGLFDRYPGLE 121
              L HAEA E  A  A D L  +   L G +R+G  +G     L S    + D +P LE
Sbjct: 64  ARYLPHAEAAEQAARAAGDALAGTTEDLSGPVRIGAPDGCANYLLPSVCARMLDAHPALE 123

Query: 122 VELVAVPRFVSILNREAEISIHLERPSVDQLVTRKLTDYRLALYASRTYLDRNPPIEKRE 181
           ++++A+PR +++  REA+++I +  P   +L  +KL DY L L   R  L R  P+  R 
Sbjct: 124 LQIIALPRVINLSKREADLAITVSPPETGRLTVQKLADYHLHLAGHRDLLAR-LPVATRA 182

Query: 182 DLAAHAWIDYVDDLLFSQELKFLSSFCRNPKVVFHSTSVIAQHQAARSGLGIAVLPCFMA 241
           D+AAH  + Y+ D++F +EL +L+    + +    S SV  Q    R+GLG+ V+  F  
Sbjct: 183 DIAAHRIVGYIPDMVFDRELDYLTELGLD-RAAVASNSVAVQLNLLRAGLGLGVVHDFAL 241

Query: 242 SGDPELVPLLPGE-GIQRSYWISSRRELHKSVRLR 275
              P+L  +L  +  ++RS++I    +  K VRLR
Sbjct: 242 PAAPDLTRVLRTDFALRRSFYIVRHADDQKVVRLR 276