Pairwise Alignments

Query, 548 a.a., choline dehydrogenase from Pseudomonas simiae WCS417

Subject, 521 a.a., Choline dehydrogenase (EC 1.1.99.1) from Pseudomonas fluorescens FW300-N2E2

 Score =  277 bits (708), Expect = 8e-79
 Identities = 197/533 (36%), Positives = 279/533 (52%), Gaps = 37/533 (6%)

Query: 8   YDYIVVGAGPAGCLLANRLSANPAHRVLLLEAGGRDNYPWIHIPVGYLFCIGNPRTDWCF 67
           YD+IV GAG AGC++A RL+     RVLL+EAG     P +  P  +   +G+ R DW F
Sbjct: 9   YDFIVCGAGTAGCVVAARLAQQDNARVLLIEAGNEYAGPEVAEPAQWPLNLGSER-DWAF 67

Query: 68  KTEAQEGLQGRALSYPRGKVLGGCSSINGMIYMRGQAQDYDGWAAE-GNAGWAWKDVLPL 126
             ++   L GR LS   GK LGG SSIN M++ RG   D+D +AAE G+  W +  VL  
Sbjct: 68  AGQSNPHLNGRRLSLNMGKGLGGGSSINVMVWARGHRSDWDHFAAESGDCAWGYDSVLDY 127

Query: 127 FKQSEN-HFAGGSEFHSDGGEWRVEQQRLHWPILDAFRDAAAQSGIAPVNDFNQGDNEGC 185
           +++ EN H +  +     GG   VEQ     P+  A  +AA++ GI   +  N    EG 
Sbjct: 128 YRRIENWHGSPDAARRGSGGPVHVEQPASPQPLAWATLEAASRLGIPRYDSPNGAMMEGP 187

Query: 186 GY-----FQVNQKAGVRWNAAKAFLKPVRQRPNLTVLTDVDVNRVLLENGRASQVIARQH 240
           G       ++NQ  G R +   ++++P   +PNLTVLT   V+RVLL   RA  V     
Sbjct: 188 GGAAITDLRINQ--GRRESVYDSYVRPRLHQPNLTVLTGALVSRVLLRGTRAVGVEVIIE 245

Query: 241 GQQVSWKARKEIVLCAGSVGSPGILQRSGIGPSNVLKPLGIDVLHELPGVGGNLQDHLQL 300
           GQ+  + A  E+VL  G+V +P +L +SGIGP + L+  GI     LPGVG NLQDH+  
Sbjct: 246 GQRHCFYAEAEVVLSMGAVNTPKVLMQSGIGPESELRTHGIVPASHLPGVGQNLQDHVAF 305

Query: 301 RLIYKLENARTLNQIAGTLWGKMGMGLR-YLYDRSGPLSMAPSQLGAFARSGPEQTSANL 359
              ++    + +           G G    LY +S       S+L A     P+     L
Sbjct: 306 GCTWEYLQPQAVG----------GGGCETTLYWKS------DSRLDA-----PDLLHCQL 344

Query: 360 EYHVQPLSLERFGEPLHAFPAFTASVCDLRPQSRGRIDIRSANPADAPLIRPNYLSHPED 419
           E+ V   +      P   +  F       RP SRGR+ +  A P+DAPLI PN LS PED
Sbjct: 345 EFAVPSPAEVGIQPPQQGWTMFAGLA---RPVSRGRLRLSGAGPSDAPLIEPNSLSAPED 401

Query: 420 LRVAADAIRLTRRIVAAPALSQFKPVEYLPGDSLQSEEQLHEAAARIGTTIFHPVGTCRM 479
           +  A  +I L R +  +   +     E +PG   ++   + +       + +HP  T +M
Sbjct: 402 MAAAFASIDLCRALGNSETFNDLVKREVVPGP--KAHRAMEQFIRNSAVSYWHPSCTAKM 459

Query: 480 GSDKDAVVDAQLRVHGVPGLRIADASVMPRITSGNTCSPTLMIAEKAAQLILS 532
           G D+ +VVD QLRV+G+  LRIADASVMPRIT GNT +P ++I E+AA L+L+
Sbjct: 460 GRDEMSVVDHQLRVYGIEKLRIADASVMPRITVGNTMAPCVVIGERAADLVLA 512