Pairwise Alignments

Query, 548 a.a., choline dehydrogenase from Pseudomonas simiae WCS417

Subject, 551 a.a., choline dehydrogenase BetA from Phaeobacter inhibens DSM 17395

 Score =  351 bits (900), Expect = e-101
 Identities = 210/532 (39%), Positives = 301/532 (56%), Gaps = 15/532 (2%)

Query: 9   DYIVVGAGPAGCLLANRLSANPAHRVLLLEAGGRDNYPWIHIPVGYLFCIGNPRTDWCFK 68
           DY++VGAG AGC +A RLS      VL++E GG D  P+I +P    + +     DW +K
Sbjct: 4   DYVIVGAGSAGCAMAYRLS-EAGKSVLVIEHGGTDAGPFIQMPGALSYPMNMSMYDWGYK 62

Query: 69  TEAQEGLQGRALSYPRGKVLGGCSSINGMIYMRGQAQDYDGWAAEGNAGWAWKDVLPLFK 128
           ++ +  L GR L  PRGKV+GG SSINGM+Y+RG A DY+ WA  G AGW++ DVLP FK
Sbjct: 63  SQPEPHLGGRELVCPRGKVVGGSSSINGMVYVRGHAGDYNHWAESGAAGWSYADVLPYFK 122

Query: 129 QSENHFAGGSEFHSDGGEWRVEQQRLHW-------PILDAFRDAAAQSGIAPVNDFNQGD 181
           + E     G   H    +WR     LH        P+  AF  A  Q+G     D+N   
Sbjct: 123 RMETWDDRG---HGGDPDWRGTDGPLHVTRGPRDNPLHAAFVKAGEQAGYPVSKDYNGEQ 179

Query: 182 NEGCGYFQVNQKAGVRWNAAKAFLKPVRQRPNLTVLTDVDVNRVLLENGRASQVIARQHG 241
            EG G  ++    G RW+AA A+LKP  +R N  ++  +   +V++E+GRA  V   + G
Sbjct: 180 QEGFGPMEMTVYKGQRWSAANAYLKPALKRDNCEMIRAL-ARKVVIEDGRAVGVEVERGG 238

Query: 242 QQVSWKARKEIVLCAGSVGSPGILQRSGIGPSNVLKPLGIDVLHELPGVGGNLQDHLQLR 301
           +    +A  E++L A S+ SP +L  SGIGP+  L   GIDV+ + PGVG NLQDHL+  
Sbjct: 239 KIEVIRANAEVILAASSLNSPKLLMLSGIGPAKHLAEHGIDVVVDRPGVGQNLQDHLEFY 298

Query: 302 LIYKLENARTLNQIAGTLWGKMGMGLRYLYDRSGPLSMAPSQLGAFARSGPEQTSANLEY 361
             +  +   TL +    L+GK  +G ++L+ ++G  +    +  AF RS       +++Y
Sbjct: 299 FQFASKQPITLFKY-WNLFGKALVGAQWLFTKTGLGASNQFESAAFIRSDKGVDYPDIQY 357

Query: 362 HVQPLSLERFGEPLHAFPAFTASVCDLRPQSRGRIDIRSANPADAPLIRPNYLSHPEDLR 421
           H  P+++   G+       F A V  +R  SRG + + SA+P DAP I  NY+S  +D  
Sbjct: 358 HFLPIAVRYDGQAAAEGHGFQAHVGPMRSDSRGEVTLASADPNDAPKILFNYMSTEKDWE 417

Query: 422 VAADAIRLTRRIVAAPALSQFKPVEYLPGDSLQSEEQLHEAAARIGTTIFHPVGTCRMGS 481
                IRLTR + A  A+  F   E  PGD+LQS+E+L+        + +HP GTC+MG+
Sbjct: 418 DFRKCIRLTREVFAQDAMKPFVKHEIQPGDALQSDEELNGFIREHVESAYHPCGTCKMGA 477

Query: 482 DKD--AVVDAQLRVHGVPGLRIADASVMPRITSGNTCSPTLMIAEKAAQLIL 531
            +D  AVVD + RV GV GLR+AD+S+ PRIT+GN   P++M  EKA+  IL
Sbjct: 478 VEDPMAVVDPECRVIGVEGLRVADSSIFPRITNGNLNGPSIMTGEKASDHIL 529