Pairwise Alignments

Query, 548 a.a., choline dehydrogenase from Pseudomonas simiae WCS417

Subject, 561 a.a., oxygen-dependent choline dehydrogenase from Burkholderia phytofirmans PsJN

 Score =  358 bits (919), Expect = e-103
 Identities = 208/534 (38%), Positives = 303/534 (56%), Gaps = 8/534 (1%)

Query: 3   IATAEYDYIVVGAGPAGCLLANRLSANPAHRVLLLEAGGRDNYPW---IHIPVGYLFCIG 59
           +A  EYDYI+VGAG AG +LA+RL+ +    VLLLEAGG D Y +     +P    F + 
Sbjct: 1   MAANEYDYIIVGAGSAGNVLASRLTEDADVTVLLLEAGGPD-YRFDFRTQMPAALAFPLQ 59

Query: 60  NPRTDWCFKTEAQEGLQGRALSYPRGKVLGGCSSINGMIYMRGQAQDYDGWAAE-GNAGW 118
             R +W ++T+ +  +  R +   RGK LGG S INGM Y+RG A DYDGWAA  G   W
Sbjct: 60  GRRYNWAYETDPEPHMNNRRMECGRGKGLGGSSLINGMCYIRGNALDYDGWAAHAGLENW 119

Query: 119 AWKDVLPLFKQSENHFAGGSEFHSDGGEWRVEQQRL-HWPILDAFRDAAAQSGIAPVNDF 177
            + D LP F+++E   AG + +H   G   V   +  + P+  A  +A  Q+G    +D 
Sbjct: 120 TYLDCLPYFRKAETRDAGANAYHGGDGPVHVTTSKPGNNPLFAAMVEAGVQAGFPRTDDL 179

Query: 178 NQGDNEGCGYFQVNQKA-GVRWNAAKAFLKPVRQRPNLTVLTDVDVNRVLLENGRASQVI 236
           N    EG G       A G R + A+ +L   + RPNLT++T    +RVL    RA  V 
Sbjct: 180 NGYQQEGFGPMDRTVTANGRRASTARGYLDRAKTRPNLTIVTHAVTDRVLFSGKRAVGVA 239

Query: 237 ARQHGQQVSWKARKEIVLCAGSVGSPGILQRSGIGPSNVLKPLGIDVLHELPGVGGNLQD 296
              HG  V+ +AR+E+++C+G++ SP +LQRSG+G S  L+ L + ++H+LPGVG NLQD
Sbjct: 240 YLHHGNAVNAQARREVLVCSGAIASPQLLQRSGVGRSTWLRELDVPLVHDLPGVGENLQD 299

Query: 297 HLQLRLIYKLENARTLNQIAGTLWGKMGMGLRYLYDRSGPLSMAPSQLGAFARSGPEQTS 356
           HL++ + Y+ +   +L   A   W +  +GL ++   +G  +    + G F R+  +   
Sbjct: 300 HLEMYIQYECKEPISLYP-ALQWWNQPAIGLEWMLKGTGIGASNQFEAGGFIRTRDDDLW 358

Query: 357 ANLEYHVQPLSLERFGEPLHAFPAFTASVCDLRPQSRGRIDIRSANPADAPLIRPNYLSH 416
            N++YH  P+++   G        F A V  +R  SRGR+ + S +P   P I  NY++ 
Sbjct: 359 PNIQYHFLPVAINYNGSNAIKMHGFQAHVGSMRSPSRGRVKLTSRDPNAHPSILFNYMAD 418

Query: 417 PEDLRVAADAIRLTRRIVAAPALSQFKPVEYLPGDSLQSEEQLHEAAARIGTTIFHPVGT 476
           P D R   D IR+TR I+  PAL +++  E  PG  L ++EQL         T FHP  +
Sbjct: 419 PLDWREFRDGIRITREIMRQPALDRYRGRELNPGAELTTDEQLDTFVRMRAETAFHPSCS 478

Query: 477 CRMGSDKDAVVDAQLRVHGVPGLRIADASVMPRITSGNTCSPTLMIAEKAAQLI 530
           C+MG D  AVVD + RVHG+  LR+ DAS+MPRIT+GN  +PT+M+AEK A  I
Sbjct: 479 CKMGYDDMAVVDNEGRVHGMEALRVVDASIMPRITTGNLNAPTIMLAEKIADRI 532