Pairwise Alignments

Query, 1021 a.a., ACR family transporter from Pseudomonas simiae WCS417

Subject, 1037 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

 Score =  577 bits (1488), Expect = e-168
 Identities = 324/1006 (32%), Positives = 555/1006 (55%), Gaps = 13/1006 (1%)

Query: 19   WYLMFVALLMGVFSYMNLGREEDPSFTIKTMVIQTRWPGATQEETLKQVTDRIEKKLEEL 78
            W +  + L+ G  ++ NLGR EDP+FTIK  ++ T +PGAT ++  ++VT  +EK +++L
Sbjct: 34   WMVSLIFLIGGTAAFFNLGRLEDPAFTIKDAMVVTSYPGATPQQVEEEVTYPLEKAIQQL 93

Query: 79   DALDYVKSYTRPGESTVFVFLKDTTSAKAIPEIWYQVRKKIDDIRGTFPQGLQGPSFNDE 138
              +D V S +  G S + V +K+      +P+IW ++R+K++D++G  P G+  P   D+
Sbjct: 94   TYVDEVNSISSRGLSQITVTMKNNYGPDDLPQIWDELRRKVNDLKGALPPGVNPPLVIDD 153

Query: 139  FGDVFGSVYAFTGDGLSMRQLRDYVEQVRAEIRSVPGLGKVEMIGQQDEVIYLNFSTRKL 198
            FGDV+G + A TG+G S ++L DYV+ +R E+  + G+ KV + GQQ E +++  S +++
Sbjct: 154  FGDVYGILLAVTGEGYSYKELLDYVDYLRRELELIDGVSKVSVSGQQQEQVFIEISMKRI 213

Query: 199  AALGIDQRQVVQSLQSQNAVTPAGVIEAGPERISVRTSGQFASEKDLANVNL--RLNDRF 256
            + LGI  + V   L +QN V+ AG I  G E I +  +G+F   + L ++ L  R     
Sbjct: 214  STLGISPQTVFNLLSTQNLVSDAGAIRIGSEYIRIHPTGEFDDVEKLGDLILSERGAQGL 273

Query: 257  YRLADIADISRGYVDPARPMFRFNGKPAIGLAIAMQKGGNIQSFGKALHERMDELTADLP 316
              L D+A++ RGYV+    +  FNGK A+ + ++  +G N+   G+    R+ EL    P
Sbjct: 274  IYLRDVAEVKRGYVEVPSNVITFNGKLALNVGVSFAQGVNVVEVGQRFDRRLAELKYQQP 333

Query: 317  VGVGVHKVSDQAEVVEEAVGGFTSALFEAVIIVLVVSFISLGMRAGLVVACSIPLVLALV 376
            +G+ + +V  Q + V+++V GF  +L +AV IV++V    +G+R+GL++   + L +   
Sbjct: 334  IGIDIAEVYSQPKEVDKSVSGFVVSLGQAVAIVIIVLLFFMGLRSGLLIGLILLLTVLGT 393

Query: 377  FVFMEYSGITMQRVSLGALIIALGLLVDDAMITVEMMITRLEKGETKEQAATYAYTSTAF 436
            F+FM+Y  I +QR+SLGAL+IALG+LVD+A++ VE ++   +KG T+ QAAT   T T +
Sbjct: 394  FIFMQYFKIDLQRISLGALVIALGMLVDNAIVVVEGILIGTQKGRTRLQAATDIVTQTKW 453

Query: 437  PMLTGTLVTVAGFVPIGLNASSAGEYTFTLFAVIAVAMLVSWVVAVLFAPVIGVHILSAN 496
            P+L  T++ V  F PIGL+  + GEY  TLF V+ +++++SW  A+   P          
Sbjct: 454  PLLGATVIAVTAFAPIGLSEDATGEYCGTLFTVLLISLMLSWFTAISLTPFFADLFFRGQ 513

Query: 497  VKPHNAE-----PGRIGRAFNGGMLWAMRNRWWAIGITVALFVASVFSMQFVQNQFFPSS 551
              P + E      G I   +   + + MR  W  +G+ V    AS++    V+  FFPSS
Sbjct: 514  KAPASGEESDPYQGFIFVVYRRFLEFCMRRAWLTMGVLVLGLAASLYGFTKVKQAFFPSS 573

Query: 552  DRPELLVDLNLPQNASINETRKAVDRLEAIIKDDPDIARWSTYIGQGAIRFYLPLDQQLE 611
              P  +VD+ +P+   I  T   +  LE  +     +   +T  G+G  RF L    +  
Sbjct: 574  TTPMFMVDVWMPEGTDIRATDAILLELEKWLSAQESVDSVTTTAGKGLQRFMLTYSPEKS 633

Query: 612  NPYYAQLVIVSKGLEERGELIARLQKRLRDDFVGIGSYVQPLEMGPPVGRPIQYRVSGKD 671
               Y ++       ++   L+AR +  L   +  I   ++ +E+GP  G  I+ R+ G D
Sbjct: 634  YAAYGEITTRVTDYQQLAALMARFRAHLDARYPQINYKLKQIELGPGGGAKIEARIVGSD 693

Query: 672  TDQVRKHAIELATLLDKNSHLGEIIYDWNEPGKVLRIDIAQDKARQLGLSSEDVAQLMNS 731
               +R  A ++  ++  +     I +DW E  KVL     + +AR+ G++  DV + +  
Sbjct: 694  PTVLRSIAAQVMDVMYADPGAYNIRHDWRERTKVLEPQFNESQARRYGITKADVDEFLAM 753

Query: 732  VVSGASVTQVHDDIYLINVVGRAEDAERGTPETLQNLQIVTPNGTSIPLLAFATVRYEL- 790
              SG ++    D   L+ +V R  + ER     ++ ++I +P  +    L   T+ YE+ 
Sbjct: 754  SFSGKTIGVYRDGTTLMPIVARLPEEERVDIRNIEGMKIWSPALSEYIPLQQVTLGYEMR 813

Query: 791  -EQPLVWRRDRNPTITIKA--SVRDEMQPTDLVKQLKPEIDKFSAGLPVGYKVATGGTVE 847
             E PL+ R++R   +T+ A   +  E     L ++L+P+I+  +  LP GY +  GG  E
Sbjct: 814  WEDPLIVRKNRKRMLTVMADPDLLGEETAATLQQRLQPQIE--AIPLPPGYFLEWGGEYE 871

Query: 848  ESGKAQGPIAKVVPLMLFLMATFLMIQLHSVQKMFLVASVAPLGLIGVVLALIPTGTPMG 907
             SG A+  + K +PL    M    +   +SV++  +V    PL +IGV   L+   TP G
Sbjct: 872  SSGDAKASLFKTMPLGYLFMFLITVFLFNSVKESLIVWLTVPLAVIGVTTGLLALNTPFG 931

Query: 908  FVAILGILALIGIIIRNSVILVTQIHEYEVAGYTPWDAVVEATEHRRRPILLTAAAASLG 967
            F+A+LG L+L G++++N ++L+ QI     +G  P+ AVV+A+  R RP+ + A    LG
Sbjct: 932  FMALLGFLSLSGMLLKNGIVLLDQIEIEMHSGKDPYLAVVDASLSRVRPVCMAAVTTILG 991

Query: 968  MIPIAREVFWGPMAYAMIGGIIIATLLTLLFLPALYVAWYKIREPK 1013
            MIP+  ++F+ PMA  ++ G+  AT+LTL+ +P LY  ++ ++ P+
Sbjct: 992  MIPLLPDIFFRPMAVTIMFGLGFATVLTLIVVPVLYRLFHHVKVPQ 1037