Pairwise Alignments

Query, 1021 a.a., ACR family transporter from Pseudomonas simiae WCS417

Subject, 1042 a.a., efflux RND transporter permease subunit from Parabacteroides merdae CL09T00C40

 Score =  474 bits (1220), Expect = e-137
 Identities = 303/1045 (28%), Positives = 539/1045 (51%), Gaps = 47/1045 (4%)

Query: 6    NLSDWALKHQSFVWYLMFVALLMGVFSYMNLGREEDPSFTIKTMVIQTRWPGATQEETLK 65
            ++S W  ++++ V++L+ V L  G  +   + + EDP   +K  ++ T +PGA+  +   
Sbjct: 2    DISKWGFQNRNLVYFLVAVLLAGGALACYQMSKLEDPEIKVKLAMVATTYPGASAHQVEL 61

Query: 66   QVTDRIEKKLEELDALDYVKSYTRPGESTVFVFLKDTTSAKAIPEIWYQVRKKIDDIRGT 125
            +VTD +EK + ++D +D V+SY+    S + V L  T     + + W  +R+K++D    
Sbjct: 62   EVTDVLEKSIRKMDNVDNVESYSFNDLSLIQVELLTTVKDDDVEQHWDLLRRKVNDASAL 121

Query: 126  FPQGLQGPSFNDEFGDVFGSVYAFTGDGLSMRQLRDYVEQVRAEIRSVPGLGKVEMIGQQ 185
             P G   P   D+FG VFG  YA TGDGLS R++ DY E ++ E+  + G+ +V++ G++
Sbjct: 122  LPSGANTPIVQDDFGKVFGMFYALTGDGLSDREMADYAELIKREVVEIEGVDRVDIYGER 181

Query: 186  DEVIYLNFSTRKLAALGIDQRQVVQSLQSQNAVTPAGVIEAGPERISVRTSGQFASEKDL 245
             E I ++     +A LG+   +V+ +L  QN  T +G  + G  RI V  + +F +  D+
Sbjct: 182  SECINISLLQDCMANLGVKPAEVLATLNGQNETTYSGYYDNGNNRIRVTVNDRFKTVDDI 241

Query: 246  ANVNLR-LNDRFYRLADIADISRGYVDPARPMFRFNGKPAIGLAIAMQKGGNIQSFGKAL 304
              + ++  +D   RL DIA I +GY DP R    +N + +IG+ +A   G +I   GKA+
Sbjct: 242  GKMFIQGHDDDQLRLRDIALIEKGYEDPTRNEMFYNQERSIGILVAASSGSDIVKVGKAV 301

Query: 305  HERMDELTAD-LPVGVGVHKVSDQAEVVEEAVGGFTSALFEAVIIVLVVSFISLGMRAGL 363
              ++ EL  + LP GV  HK+  Q E V +++G F   L E+V+IV+ +  +++G ++GL
Sbjct: 302  EAKLAELKDNRLPAGVDCHKIFYQPERVGDSLGTFVINLIESVVIVVFILMLAMGFKSGL 361

Query: 364  VVACSIPLVLALVFVFMEYSGITMQRVSLGALIIALGLLVDDAMITVEMMITRLEKGETK 423
            ++  S+ + +   F+F++++G TMQRVSL A ++A+G+LVD+A++ ++ ++  L+ G+ +
Sbjct: 362  IIGISLVVTVFGSFLFLQFAGGTMQRVSLAAFVLAMGMLVDNAIVIIDGILVDLKAGKDR 421

Query: 424  EQAATYAYTSTAFPMLTGTLVTVAGFVPIGLNASSAGEYTFTLFAVIAVAMLVSWVVAVL 483
             +A T     TA P+L  TL+ +  F+PI ++  +AG YT  LF V+AV++L+SWV+A+L
Sbjct: 422  MEAMTAIGRQTAMPLLGATLIAIIAFLPIYMSPDTAGVYTRDLFIVLAVSLLLSWVLALL 481

Query: 484  FAPVIGVHILSANVKPHNA----EPGRIGRAFNGGMLWAMRNRWWAIGITVALFVASVFS 539
              P++    L   V+  N+      G+I       + + + +R       VAL + S +S
Sbjct: 482  HVPLMANRRLHPAVENDNSGKRVYKGKIYAILRAALRFGLSHRLGFTLTMVALLLLSAYS 541

Query: 540  MQFVQNQFFPSSDRPELLVDLNLPQNASINETRKAVDRLEAIIKDDPDIARWSTYIGQGA 599
             +F++  FFP     +L ++  LP+  +       +  +EA +K   +I   +  IG   
Sbjct: 542  YRFLRQGFFPDMVYDQLYMEYKLPEGNNSTRVANDLKEIEAYLKTRKEITNVTASIGGTP 601

Query: 600  IRFYLPLDQQLENP--YYAQLVIVSKGLEERGELIARLQKRLR----DDFVGIGSYVQPL 653
             R+ L   + + NP   Y +L+I     +E  E I  +Q+ L     D +V +  Y    
Sbjct: 602  GRYNLV--RSIANPSLAYGELIIDFTSPDELVENIDEIQEYLTRQYPDAYVKLKRYNLMF 659

Query: 654  EMGPPVGRPIQYRVSGKDTDQVRKHAIELATLLDKNSHLGEIIYDWNEPGKVLRIDIAQD 713
            +       PI+ +  G D   + + A     +++    +  I  DW     VL I+  Q 
Sbjct: 660  KK-----YPIEAQFLGPDPAVLHRLADSARHIMENTPEVCLITTDWEPQVPVLTIEYDQP 714

Query: 714  KARQLGLSSEDVAQLMNSVVSGASVTQVHDDIYLINVVGRAEDAERGTPETLQNLQIVTP 773
             AR LGLS  DV+  + +   G  +   ++ I+  N+  +  D +    E L N Q+ + 
Sbjct: 715  AARALGLSRSDVSLSLLTATGGIPIGSFYEGIHKNNIYLKCLDGQGRPIEDLGNTQVFST 774

Query: 774  ----NG-----TSIPLLAFATVRYELEQPLV---------------WRRDRNPTITIKAS 809
                NG       + L A    + EL + L+               W     P    + S
Sbjct: 775  LPSLNGLLNEENMVKLKAGTLSKEELIESLMGSTPLKQISKGIDVRWEDPVVPRYNGQRS 834

Query: 810  VRDEMQPTDLVKQLKPEI---DKF-SAGLPVGYKVATGGTVEESGKAQGPIAKVVPLMLF 865
             R +  P   V+  K  +   +K     LP GY +   G    S ++   + K  PL + 
Sbjct: 835  QRVQCSPVPGVETEKARLAVAEKLEQIELPAGYSLQWQGEKNASDQSMKYLFKNFPLAII 894

Query: 866  LMATFLMIQLHSVQKMFLVASVAPLGLIGVVLALIPTGTPMGFVAILGILALIGIIIRNS 925
            LM   L++     +K  ++    P+  +GVV+ ++ TG    FVAI+G L LIG+II+N 
Sbjct: 895  LMIAILIMLFKDYRKPAIIFCSIPMVFVGVVMTMLVTGKTFNFVAIVGTLGLIGMIIKNG 954

Query: 926  VILVTQIHEYEVAGYTPWDAVVEATEHRRRPILLTAAAASLGMIPIAREVFWGPMAYAMI 985
            ++L+ +I      G  P  A++++ + R RP+++ A    LGMIP+  +  +G +A +++
Sbjct: 955  IVLMDEITLQIGQGTEPVTALIDSAQSRLRPVMMAALTTILGMIPLLTDAMFGSLAASIM 1014

Query: 986  GGIIIATLLTLLFLPALYVAWYKIR 1010
            GG++  T++TL+F+P LY  ++ I+
Sbjct: 1015 GGLLFGTVITLVFIPVLYALFFHIK 1039