Pairwise Alignments

Query, 649 a.a., DNA topoisomerase III from Pseudomonas simiae WCS417

Subject, 876 a.a., DNA topoisomerase III from Ralstonia sp. UNC404CL21Col

 Score =  302 bits (774), Expect = 4e-86
 Identities = 200/618 (32%), Positives = 314/618 (50%), Gaps = 33/618 (5%)

Query: 3   LYLCEKPSQAKDIAAVLGASRRGDGCWLGNGVTVTWCIGHLLETAPPDAYDEKYKRWVLA 62
           L + EKPS A DIA  LG   + D  +  +   ++  +GHL+E A PD Y+ K  +W  A
Sbjct: 5   LIIAEKPSVAADIARALGGFTKHDEYFESDDYVLSSAVGHLVEIAAPDEYEVKRGKWSFA 64

Query: 63  DLPIVPEKWKMRVKPKTASQFKAVKRLLG--EAQELVIATDADREGEMIARELVEHCRYR 120
            LP++P  + +R   K+ S+ K + RL+   +   L+ A DA REGE+I R + +H   +
Sbjct: 65  HLPVIPPHFDLRPIAKSESRLKVLTRLIKRKDVTSLINACDAGREGELIFRLIAQHANTK 124

Query: 121 GPIQRLWLSALDDASIRKALAALKPGAETFSLYHSALGRSRADWLIGMNMSRLFTLLGRQ 180
            P++RLWL ++   SIR   A L+   E   L  +A  RS ADWL+G+N +R  T    +
Sbjct: 125 LPVKRLWLQSMTPQSIRDGFAKLRSDEEMIPLADAARCRSEADWLVGINGTRAMTAFNSK 184

Query: 181 SGYQGVLPVGRVQTPTLRLVVDRDRSIADFVPVAYWAIDVDLQHERITFTAQW---RAAE 237
            G   +  VGRVQTPTL +VV+R+  I  FV   YW +  +       +  +W   +  +
Sbjct: 185 GGGFFLTTVGRVQTPTLSIVVEREEKIKRFVQRDYWEVRAEFIAAAGLYEGRWFDPKFKK 244

Query: 238 DACDDQGRCLDPQLARDAADAMRNAATAR----LVKLRTERMREVAPLPFDLGTLQEICS 293
           +  D + R  D +L  + A+A    A  R     V   ++   +++P  FDL +LQ   +
Sbjct: 245 NEFDPEQR--DSRLWSE-AEAKSIVAACRDKPGSVTEESKPSTQMSPALFDLTSLQREAN 301

Query: 294 KKLGLGAQETLDIAQSLYETHKVITYPRSDCGYLPLSQHSEAPKILAALARAD----AAV 349
            + G  A+ TL +AQ+LYE HKV+TYPR+D   LP        + L  L  +        
Sbjct: 302 GRFGFSAKNTLGLAQALYEKHKVLTYPRTDSRALPEDYMGTVKQTLDMLGESSPNYLTHA 361

Query: 350 NELMPHIETQRRSRAWNDAKVSAHHGIIPTGAGKDVGQLTGKHRAVYTLIRARYLAQFLP 409
            +++ +   +   R ++++K+S H  IIPT        L+   + +Y L+  R+LA F P
Sbjct: 362 KKILANQWVKPNKRIFDNSKISDHFAIIPTLQAPK--NLSEPEQKLYDLVVRRFLAVFFP 419

Query: 410 NHEYDRTQADFDCAGQALRAVGKVVIEPGWKRALPEALAPAKGREAPAPQA-LPALVQGQ 468
             EY  T    + AG   +  GKV++ PGW            GREA    A L  + + +
Sbjct: 420 AAEYQVTTRITEVAGHHFKTEGKVLVNPGW--------LVVYGREAQGEDANLVPVAKDE 471

Query: 469 DYAVAKVNLKDLWTQPPKPFTEGDLIKAMKNVAKLVEDPLLKQKLKDTTGIGTEATRAGI 528
                KV    L T+PP  + E  L+ AM+   KLV+D  L++ +    G+GT ATRA I
Sbjct: 472 KVKTDKVEPVGLTTKPPARYNEATLLSAMEGAGKLVDDDALREAMAG-KGLGTPATRAAI 530

Query: 529 IQGLLDRGYLVKNGKALSATPAAFSLIDAV----PRAIADPGTTAIWEQALDMVQSGEMS 584
           I+GLL   YLV+ G+ L  T  AF L+  +       +     T  WE  L +++ G++ 
Sbjct: 531 IEGLLTEKYLVREGRELIPTAKAFQLMTLLRGLGVEELTQAELTGGWEHKLSLIERGQLE 590

Query: 585 LEEFVAKQAAWMSKQVAR 602
            +EF+ ++ A M++Q+ +
Sbjct: 591 RDEFM-REIAQMTQQIVK 607