Pairwise Alignments

Query, 146 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 637 a.a., cyclic nucleotide-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 65.9 bits (159), Expect = 1e-15
 Identities = 39/143 (27%), Positives = 78/143 (54%), Gaps = 11/143 (7%)

Query: 9   KAKDQKNQEVHVIKHDHTVFEALVRMSEKNVGALPVVQDGVV----------VGIISERD 58
           K K    +    I    ++ +A  RM+++NV AL ++ + ++          VGI++ERD
Sbjct: 159 KVKQLLTRSAPTIDKQASIQQAAQRMADENVSALLILDNQILLDTEDDSTPMVGIVTERD 218

Query: 59  YARKIMLKGLSSVTTKVHEVMSSPVITVDTHKKVDECMNIMTDSHLRHLPVVENGKLLGL 118
             R+++ +G+  VT  V +VM+  VI++D +  V E M  M  +++ HLPV+   + +G+
Sbjct: 219 LCRRVLAQGMD-VTQTVSQVMTHEVISLDHNAYVYEAMLAMLRNNVHHLPVLRERQPIGI 277

Query: 119 LSIGDLVKEAIADQADLIKQLEQ 141
           + + D+V+    +   L+ ++ Q
Sbjct: 278 IDMTDIVRHESQNSLLLVSRIYQ 300



 Score = 31.2 bits (69), Expect = 3e-05
 Identities = 18/86 (20%), Positives = 41/86 (47%), Gaps = 10/86 (11%)

Query: 71  VTTKVHEVMSSPVITVDTHKKVDECMNIMTDSHLRHLPVVENGKLL----------GLLS 120
           +T+KV ++++    T+D    + +    M D ++  L +++N  LL          G+++
Sbjct: 156 ITSKVKQLLTRSAPTIDKQASIQQAAQRMADENVSALLILDNQILLDTEDDSTPMVGIVT 215

Query: 121 IGDLVKEAIADQADLIKQLEQYIRGE 146
             DL +  +A   D+ + + Q +  E
Sbjct: 216 ERDLCRRVLAQGMDVTQTVSQVMTHE 241