Pairwise Alignments

Query, 146 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 136 a.a., putative signal transduction protein with CBS domains (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 57.0 bits (136), Expect = 1e-13
 Identities = 35/117 (29%), Positives = 65/117 (55%), Gaps = 3/117 (2%)

Query: 18  VHVIKHDHTVFEALVRMSEKNVGALPVVQDGVVVGIISERDYARKIMLKGLSSVTTKVHE 77
           V  +  + +V  A   M+  ++GAL VV DG  VGI+++RD   +   K  +     V  
Sbjct: 11  VMTVAPEASVQTAAALMANLDIGALAVVDDGRPVGILTDRDIVVRHAAK--AGTDALVGT 68

Query: 78  VMSSPVITVDTHKKVDECMNIMTDSHLRHLPVVE-NGKLLGLLSIGDLVKEAIADQA 133
           VM+  V+T  + + ++   ++M D  +R L V++ + +++GLLS+GD+  +A  + A
Sbjct: 69  VMTPCVVTCRSDQTIERAAHLMADRQIRRLVVLDADNRVVGLLSLGDIANDASEELA 125



 Score = 31.6 bits (70), Expect = 5e-06
 Identities = 16/51 (31%), Positives = 28/51 (54%)

Query: 75  VHEVMSSPVITVDTHKKVDECMNIMTDSHLRHLPVVENGKLLGLLSIGDLV 125
           V  +M  PV+TV     V     +M +  +  L VV++G+ +G+L+  D+V
Sbjct: 3   VSRIMRKPVMTVAPEASVQTAAALMANLDIGALAVVDDGRPVGILTDRDIV 53