Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 299 a.a., Cyn operon transcriptional activator from Pseudomonas fluorescens FW300-N2E2

 Score =  118 bits (296), Expect = 1e-31
 Identities = 81/292 (27%), Positives = 143/292 (48%), Gaps = 2/292 (0%)

Query: 1   MTVKQMRAFLAVAQSLSFAAACERLHLSQSALSLTIKGLEEGLGGRLFSRNTRNVALTPE 60
           M  + ++ FLAVA+ LSF  A   LH+SQ ALS  ++ LEE LG +LF R+ R   LT  
Sbjct: 5   MLARHVQYFLAVAEHLSFTKAAAALHVSQPALSQQVRQLEESLGAQLFDRSGRTTRLTDA 64

Query: 61  GESLLPLARRLIADWDNAEDELRQRFTLQRGRVTVAAMPSFAGNLLPPILKIFRARYPQV 120
           G+  L  ARR       A+  +     L RG + +A  P+F   L+ P++K F +RYP++
Sbjct: 65  GDVYLLYARRAYQQLREAKSAIHDVSDLTRGSLRLAVTPTFTTYLVGPVIKAFHSRYPKI 124

Query: 121 NVTVHDLINEQVLEMVRDRQVELGVAFEPAEGSSLAFTPLYLDRFIAVVPGDSPLAECAE 180
            + + ++  E++ E++   +++ G+AF+     ++   PL  +    VV     LAE   
Sbjct: 125 TLNLKEISQERIEELLLAGELDAGIAFDEINTPNIDAIPLLNETLALVVSRQHRLAEERS 184

Query: 181 IDWKTLLEQPFITLQRPSTVRVMLEEHLGALHMKLPVALESHQLATVGKMVASGLGVSAV 240
           I  + L  +  I L      R  ++ +     +   V +E++ L  V ++V      + +
Sbjct: 185 IGLQDLNAESLILLSPEFATREQIDRYFRTHAIHPQVQMEANALGAVIEIVRRTNLSTLL 244

Query: 241 PALCARQMEEAGAHCITLSDPVIERPIGVLTKPGHELSAAAQVLFDIFRDEA 292
           PA  A   ++  A  I L    ++R   ++ +     SAA +V  ++ ++ A
Sbjct: 245 PAKIALAHDDLVA--IALEPERLQRTAVLMRRKDAFQSAAMRVFIEVAKEVA 294