Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 307 a.a., transcriptional regulator, LysR family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  112 bits (279), Expect = 1e-29
 Identities = 78/253 (30%), Positives = 115/253 (45%), Gaps = 3/253 (1%)

Query: 1   MTVKQMRAFLAVAQSLSFAAACERLHLSQSALSLTIKGLEEGLGGRLFSRNTRNVALTPE 60
           M ++ ++ FLAVA  LSF  A E LH + S ++  I+ LEE LG  LF R  R V LT  
Sbjct: 1   MDIRHLKTFLAVAAGLSFRKAAESLHYAPSTVTAQIRALEEDLGAPLFERTGRRVLLTDH 60

Query: 61  GESLLPLARRLIADWDNAEDELRQRFTLQRGRVTVAAMPSFAGNLLPPILKIFRARYPQV 120
           G  LLP ARR+    D+A   +        G ++V    S     LP  L+ FR R+P  
Sbjct: 61  GRRLLPRARRIAEMADDARRAVTH--DADSGELSVRMSQSLGMLCLPEALRRFRVRFPAT 118

Query: 121 NVTVHDLINEQVLEMVRDRQVELGVAF-EPAEGSSLAFTPLYLDRFIAVVPGDSPLAECA 179
            V V       +   +R  +V+L +    P     +    L  +    +    SPLA   
Sbjct: 119 RVHVATASRHGLAADLRHGEVDLALLLGRPFAADGVDMETLRHEPLACIAAPGSPLAGHG 178

Query: 180 EIDWKTLLEQPFITLQRPSTVRVMLEEHLGALHMKLPVALESHQLATVGKMVASGLGVSA 239
            +    L  QP +  +   ++R  +E+ L A H++    LE   +  V + VA+GLGV+ 
Sbjct: 179 RVTPADLAGQPLVLTRHVWSLRPAIEQTLAAAHVQPGSVLECSSIVIVKRCVAAGLGVAV 238

Query: 240 VPALCARQMEEAG 252
           VP    R   + G
Sbjct: 239 VPLCAVRDEVDRG 251