Pairwise Alignments

Query, 351 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 342 a.a., Predicted permeases from Phaeobacter inhibens DSM 17395

 Score = 73.9 bits (180), Expect = 6e-18
 Identities = 72/314 (22%), Positives = 125/314 (39%), Gaps = 46/314 (14%)

Query: 64  LAAALAYAQVYFLAIWKAAVLAVILGSLLQVLIPRDWLLRLFGRAGLGSTLRGGLFALPG 123
           LA  + +A    L   +  + AV+L S L+       ++R F    +       +F    
Sbjct: 40  LAEVIRFAGAALLHTGRYILFAVLLLSYLKATGAEVMVVRAFEGREVRMIFLAAVFGGLA 99

Query: 124 MMCSCCAAPVAAGMRRQQVSVGAALAFWIANPVLNPATLVFMGFVLGWGFTALRLVAGIV 183
             CSC   P  AG+      + A +AFW+A+P+++P TL+     LGW F   + VA + 
Sbjct: 100 PFCSCEVIPFIAGLLALGAPLSAVMAFWLASPLIDPPTLLITAGALGWPFAIAKAVAAVA 159

Query: 184 LVV--GVSLVAQR-----ISRPDQVP---------------------EPALEAMAEVSVV 215
           L +  G ++ A R      S   Q P                     EPA  +      +
Sbjct: 160 LGLFGGFAIKALRGAGAFASPLRQAPTSGCCGCGAPKAEAPVWAFWREPARRSQFRQEFI 219

Query: 216 ESQPFLSRWLR---TLWQLFWSTIPVYILAVLILGAARVWLFPHVDGAMTNSLVWLVPLA 272
            +  FL +WL     L  L  S +P  ++A L+ G                 L+ +   A
Sbjct: 220 SNGLFLVKWLTLAYVLEALLVSYVPADLIATLVGG---------------EGLLPIATAA 264

Query: 273 IVGTLFVIPTAAEIPIVQTMMALGMGTGPAVALLMTLPSVSLPSLLMLRKDFDARVLATV 332
           +VG    + +    P++  +M  GM  G A+A ++     S+P++  +      +V AT 
Sbjct: 265 LVGMPAYLNSYVAPPLLAGLMDQGMSAGAAMAFMVAGAVSSIPAMAAVWSLVKPQVFATY 324

Query: 333 AGLTMLVGVVCGLI 346
             L +   ++ G++
Sbjct: 325 LALGITGAILSGIL 338