Pairwise Alignments

Query, 364 a.a., tRNA 2-selenouridine synthase from Pseudomonas simiae WCS417

Subject, 361 a.a., selenophosphate-dependent tRNA 2-selenouridine synthase from Klebsiella michiganensis M5al

 Score =  297 bits (761), Expect = 3e-85
 Identities = 162/354 (45%), Positives = 218/354 (61%), Gaps = 4/354 (1%)

Query: 9   RDIFLNDRPMMDTRAPVEFVKGAFPGAVNLPLMTDDERQRVGTCYKQQGQQAAIVLGHEL 68
           R I  +D P++D RAP+EF + A P AVNLPLM DDER  VGTCYK+QG +AA+ LGH+L
Sbjct: 9   RQILASDTPLIDVRAPIEFRQSAMPAAVNLPLMNDDERAAVGTCYKRQGPEAALALGHQL 68

Query: 69  VSGAIKAQRIEQWAQFAQANPEGYLYCFRGGLRSQIVQQWLKTEAGIEYPRVGGGYKAMR 128
           VSG I+A R+  W +     PEGYL C RGG RS IVQQWL  +AG++YP + GGYKA+R
Sbjct: 69  VSGEIRASRLAAWKEACARYPEGYLCCARGGQRSHIVQQWL-NDAGVDYPLITGGYKALR 127

Query: 129 SFLLETVEQAATQCDFVLLGGMTGTGKTEVLGQLRNALDLEGHANHRGSSFGKRATGQPS 188
              ++  E+   Q   VL+GG TG GKT+++    + +DLEG A+HRGSSFG+    Q  
Sbjct: 128 QAAIQLTEE-LVQRPIVLIGGCTGNGKTQLVCAQPDGIDLEGLAHHRGSSFGRTLQEQYQ 186

Query: 189 NIDFENRLAVDLLKKRAGGIEGFVVEDESRMIGSCALPLPLHKGMQTYPMVWLEDSVEGR 248
              FEN LAV +LKK       +V+EDE  MIG+  LP  +   M   P+  +ED  E R
Sbjct: 187 QATFENHLAVAMLKKSERQTR-WVLEDEGHMIGANHLPECMRIRMAQSPLAVVEDPFEIR 245

Query: 249 VERILRDYVVDLCAEFVDVFG-EQGHALFAERLTQSLANIHKRLGGERFQRLQAVMQDAL 307
           +ER+  +Y   +  +F+  +G EQG   ++E L   L  I +RLG +RF +L A + +AL
Sbjct: 246 LERLREEYFTRMHRDFLAAYGEEQGWRAYSEYLHHGLFAIRRRLGLQRFAQLTARLDEAL 305

Query: 308 AEQARSGAVDLHRVWIEGLLREYYDPMYAFQRESKGARIEFAGEQGAVVEYLRE 361
            EQ RS + + H  W+  LL EYYDPMY +Q   K  +I F G    V  +L +
Sbjct: 306 LEQQRSASTEAHFSWLVPLLNEYYDPMYRYQLGKKAEKIIFRGSWQDVAAWLAQ 359